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SCNpilot_expt_1000_bf_scaffold_15186_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4850..6283)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037DD809 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 496.0
  • Bit_score: 553
  • Evalue 2.40e-154
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 479.0
  • Bit_score: 444
  • Evalue 3.80e-122
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADP71289.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 479.0
  • Bit_score: 444
  • Evalue 1.70e-121

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGTTTCGAACCGTGATAGCGGGGATCGCCTTGCTGGCGATCCTTGCAGGCGGCGTCGCCGGCTACCGATTAGGAGCCGGTGCGTGGCCAGCGTTGTCCGCCCGTGAGCCGGTGAAGACGGCGTACGGCACCGATGCAAAGGGCGCGGGGCCTGAAGTCGCGCGCACCGTGCTGTATTGGAAGCACCCTGATGGTAGCGCCGATTTCTCGGCTGAGCCTAAGAAGACGCCGGACGGCCGTGACTTTGTCCCCGTCTACGAGGATCAGGAAGGCGATTTTAAAGAAAGCAAGCCCCGGCCGGCAGCCAAGGACAAAGGCGGCAGCCGCAAGCTCCTCTACTACCGCAACCCGATGGGGCTCGCCGACACCTCGCTGGTGCCGAAGAAGGACTGGATGGGGATGGACTACATTCCCGTCTATGAAGGCGAGGACGACGCCAGCACCGTCACTGTAAGTCTCGACAAGGTGCAGCGGTCCGGCGTGCGCACGGCCCTCGTGGAGCGCCGCAACCTTGTGCAGGCAGTTCGTTCACCCGGTACCGCAAAGCCGGATGAACGCAGCTTGCGCATCGTTTCGCTGCGCGCCGACGGCTTCATCGAGAAGCTCTACGTCAACGAGACAGGCAAGCAGGTCCGGGCAGGAGACAAACTGTTCCGCCTCTACAGCCCGCAAATCGTTAGCGCGCAAATTGATTATCGCACGAGCGCCGGAGCTGATGGGGGATCACGCAATGAGAGCGGAGCTCTTCAGAAGCTCAGGAACCTTGACATACCCGACTCGGTGATCGAGGCCCTGCGCAAAGACCTCAACCCGCAGATGTCGATCGACTGGCCGGCACCGACAGCCGGGGTCGTGATGCAGAAGCGCGTCATCGAAGGTCAGATGGCCAAGGCCGGCGAGGAGCTGTACCGCATCGCCGACCTGACCAACATTTGGGTGATCGCCGACGTTGCGGAGCAGGACCTGGGCCTCGTGCAAATCGGGGCTCTGGCGATGGTCAGCTTCCGTGCGTTTCCCGGCAAGAGTTTCGAAGGACGGGTGACATTCGTGCTTCACGAGCTCGATATGAGCACGCGCACCGCCAAAGTGCGCATCGAAGTGCACAACCCCGATCATCTCATTAAGCATGAAATGTATGCCGACGTTGAAATCGGCGCACGTACCGGTGAAGCCGCGCGGCTGGCGGTGCCCGCCTCAGCGGTGATCGACAGCGGCAACCGGCAGGTGGTGATCGTTGCCAAAGGTGAGGGGCGGTTTCAGCCGCGGCCCGTGAAGCTGGGCATGCGTGCCGACGACCATATCGAAATCCTCGACGGCGTGACGGAAGGTGAGGAGGTCGTCACGGCTGCCAACTTCCTGATCGATGCCGAAAGCAATCTCAAGGCGGCCTTGCAAGCCTTCACCCAGCCCGCGGCAGCGGAGGCCAAGCCATGA
PROTEIN sequence
Length: 478
MFRTVIAGIALLAILAGGVAGYRLGAGAWPALSAREPVKTAYGTDAKGAGPEVARTVLYWKHPDGSADFSAEPKKTPDGRDFVPVYEDQEGDFKESKPRPAAKDKGGSRKLLYYRNPMGLADTSLVPKKDWMGMDYIPVYEGEDDASTVTVSLDKVQRSGVRTALVERRNLVQAVRSPGTAKPDERSLRIVSLRADGFIEKLYVNETGKQVRAGDKLFRLYSPQIVSAQIDYRTSAGADGGSRNESGALQKLRNLDIPDSVIEALRKDLNPQMSIDWPAPTAGVVMQKRVIEGQMAKAGEELYRIADLTNIWVIADVAEQDLGLVQIGALAMVSFRAFPGKSFEGRVTFVLHELDMSTRTAKVRIEVHNPDHLIKHEMYADVEIGARTGEAARLAVPASAVIDSGNRQVVIVAKGEGRFQPRPVKLGMRADDHIEILDGVTEGEEVVTAANFLIDAESNLKAALQAFTQPAAAEAKP*