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SCNpilot_cont_1000_p_scaffold_4880_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 5090..5833

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 234.0
  • Bit_score: 350
  • Evalue 1.70e-93
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 236.0
  • Bit_score: 347
  • Evalue 3.30e-93
Ribonuclease PH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RNPH_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 236.0
  • Bit_score: 347
  • Evalue 1.00e-92
  • rbh

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGCCCCCTTCAATCGACTTGCCTGTCACCGCCCGCCCCGATGGCCGCGCCCCGGATACGATGCGCCCCGTCAGCCTGACGCCCGGCTTTTCCCGCCATGCCGAAGGCTCCTGCCTGGTCAAGTTCGGCAACACCCATGTGCTGGTCACCGCCAGCCTGGAGGAAAAGGCGCCCCCCTTCCTGAAAGGCTCGGGCAAGGGCTGGGTGACGGCGGAATACGGCATGCTGCCCCGCTCCACCCATGAGCGCATGCGCCGCGAGGCGGCGGCCGGCAAACAGTCTGGCCGCACCCAGGAAATCCAGCGCCTGGTGGGCCGCAGCCTGCGCGCGGTGTGCGACTTCACCGCGCTGGGCGAGCGGCAGATCGTGATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCACTGCCGCCATCACAGGCGGCTTCGTGGCGCTTTCCCAGTGCGTCGCCTTCATGAAGCGGGTCGGCATGGTGACGGCGCCGGTGATCAGGGACCACGTCGCCGCCATATCGTGCGGGATCGTGCGCGGGCTGCCCGTCCTGGACCTGAACTATGACGAAGATTCCACCGCCGAGACCGACGCCAATTTCGTGCTGACCGGCGCGGGCGGGCTGGTGGAGATCCAGGGCACCGCGGAAGGCGCGCCGTTCACCGAGGATCAGCTGACCGCGCTCTTGCGCCTGGCGCGCAAGGGCATCGGCGAACTGGTCGAATTGCAGAAGCAGGTCCTGGCGTGA
PROTEIN sequence
Length: 248
MPPSIDLPVTARPDGRAPDTMRPVSLTPGFSRHAEGSCLVKFGNTHVLVTASLEEKAPPFLKGSGKGWVTAEYGMLPRSTHERMRREAAAGKQSGRTQEIQRLVGRSLRAVCDFTALGERQIVIDCDVLQADGGTRTAAITGGFVALSQCVAFMKRVGMVTAPVIRDHVAAISCGIVRGLPVLDLNYDEDSTAETDANFVLTGAGGLVEIQGTAEGAPFTEDQLTALLRLARKGIGELVELQKQVLA*