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SCNpilot_cont_1000_p_scaffold_4880_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(7700..8944)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid ABC transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGF3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 412.0
  • Bit_score: 300
  • Evalue 3.20e-78
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 394.0
  • Bit_score: 334
  • Evalue 2.80e-88
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 405.0
  • Bit_score: 300
  • Evalue 1.00e-78

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCTTGGCTCATTGCCTTCCCGTTTTGCCCGTCCCCCCCGGTTTCTTGCCATGTCGGCCATGTGCGCGACAGTGCTGCTGTCGGCCTGCGCGACCCAGCCACCCGCGCCGCCGCCTCCGCGCGTGGCGCCCCCTGCACCCGCGCCGGTGGCCAAGAATCCGCTGGACCGCGACCAGGCCGAATATCTGCGCCTTCCGGGCCTTCCCGAAGGTACGCCGGTGCGGGTGGGTGTGATCCTGCCCTTGTCCAGCGGTTCACCGGCCACGCGCAACCTGGCCCAGTCGATGCTGAAGGCCGCCGAGCTGGCCATGTTCGATTCCAAGAACCACGGCATCCTTCTGATGGTCGGCGATGAGGGCAATGGCGGTGCCCAGGCGGCGGAGGCGGCGAAGAACCTTCTGGCCCAGGGCGCCGAAGTGATCGTGGGGCCGCTGTTCGGTCCGTCTGTGGCGGCGGTGGCGCCGGTTGCGCGCGACCGCGGCGTGCCGGTGCTGGCCTTCTCGACCGAGCGCAGCGTGGCGGGCGATGGCGCCTATCTGATCAGCTTCCTGCCGCAGAACGAAGTGCGCCGGGTGGTTTCATACGCCGCCTCGCGCGGGCACCAGAAATTCGCCGCCCTGATCCCGCAGAGTGCCTATGGCGATCTGGCGCTGAACGAGTTCGAAAATTCCGTCAAGGCGGCCAAGGGCCAGGTGGTGGACATCGAGCGCTTCACGCCGCGGACCGGAGCGGTGATGGGTTCGGCGGGCGCGGTGGCAAAAAGCGGCGCCGACGCGGTGCTGATCGCCCAGGGTGGTCCGCTGGTGAAGGAGATCGCGCCCACCCTGCAGTTCGACGGCATGGGACCGGGCAAGGTGCAGCTGATGGGCACCGGGCTGTGGGACGATGCGTCGCTGCAGAAGGAACCGACGCTTGAGGGCAGCTGGTATGCCGCGCCCTCGCCCAAGGCGGACGACGCATTCAATGAACGCTATCGCGCCACCTTCAATTCGCCGCCGGCCAACCTGGCCAGCCTGGCCTATGACGCGATGTCGCTGGTGGCGCTGCTGGCCGAGGGCCAGCCCTATCACCGCTTCACCCAGTCCGCCCTGATGGACCCCAACGGCTTTTCCGGAGTGGACGGCATCTTCCGCTTCAATGCCGACGGCACCTCCGAGCGCGGGCTGGCGGTGCTGGAGATGACGCCGCTGGGGCCCGTGGTGGTCAGCCCGGCGCCGACGACTTTTCAGGGGAAGAGCTCTTAA
PROTEIN sequence
Length: 415
MLGSLPSRFARPPRFLAMSAMCATVLLSACATQPPAPPPPRVAPPAPAPVAKNPLDRDQAEYLRLPGLPEGTPVRVGVILPLSSGSPATRNLAQSMLKAAELAMFDSKNHGILLMVGDEGNGGAQAAEAAKNLLAQGAEVIVGPLFGPSVAAVAPVARDRGVPVLAFSTERSVAGDGAYLISFLPQNEVRRVVSYAASRGHQKFAALIPQSAYGDLALNEFENSVKAAKGQVVDIERFTPRTGAVMGSAGAVAKSGADAVLIAQGGPLVKEIAPTLQFDGMGPGKVQLMGTGLWDDASLQKEPTLEGSWYAAPSPKADDAFNERYRATFNSPPANLASLAYDAMSLVALLAEGQPYHRFTQSALMDPNGFSGVDGIFRFNADGTSERGLAVLEMTPLGPVVVSPAPTTFQGKSS*