ggKbase home page

SCNpilot_cont_1000_p_scaffold_1256_curated_26

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 24678..25517

Top 3 Functional Annotations

Value Algorithm Source
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 278.0
  • Bit_score: 256
  • Evalue 1.10e-65
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 278.0
  • Bit_score: 256
  • Evalue 5.00e-65
Serine--tRNA ligase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWG4_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 278.0
  • Bit_score: 256
  • Evalue 3.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCACGATATTCGGCTGATCCGCGAGGATTCAGAAGGCTTTATCCGGGGGCTGGCGCGGCGGGGGCTGGCCGATGCGGCCGCCACCGTGGAGGCCGTTCGCGACAAGGACCAGGCGCTGCGCGACCTGTTGGTGGAGCTTCAGGCCAGGCAGGCCCGCCGCAACGAGGCTTCCAAGCTGATCGGCCAGGCCAAGGCGAAAAAGGACGAGGCGGGCGCCCAGGCCCTGATGGCCGAGGTGACGGGGCTGAAGGACGCCATCCAGCAGGGCGAGGCCGAGCAGCGGCGGCTGGAAGAGGAATTGAAGCGGGAGCTGGCGGTGATCCCCAACATCCCCGCCGAGGATGTGCCGGACGGCGCGGACGAGGGTGCCAATGTGCCGGTGCCTGAGCGCGCGTTCGGCACGCCGCCGGGCATCAATGCGCCCAGACAGCATTTCGAGATCGGCGAGGCGCTGGGCCAGATGGATTTCGAACGTGCCGCCAAGGTGTCGGGCGCGCGGTTTGTGTATCTGAAAGCCGACCTGGCGCGGCTGGAGCGGGCGCTGGCCAATTTCATGCTCGACATCCACACCGGCACTTTCGGTTACACCGAGGTCAATCCGCCGGTACTGGTGCGTGATAGCGCGATGTTCGGAACTGGCCAGTTACCAAAATTTTATAACGACCAATTTGCGGCGTACCAAGAACCCGATCTGCGCGCAAACTTCAAAAAAGATATGGAAGCCGCGCTAGCAAATATTAAAGGCATCGCAAAGCAGGTGCCGCTCGACGAAATAAAAGATTTCACGGTTGGAAAAATTAAAGATGACCCGACAAGGTTTTGGTTAGTCCCCACCGCC
PROTEIN sequence
Length: 280
MHDIRLIREDSEGFIRGLARRGLADAAATVEAVRDKDQALRDLLVELQARQARRNEASKLIGQAKAKKDEAGAQALMAEVTGLKDAIQQGEAEQRRLEEELKRELAVIPNIPAEDVPDGADEGANVPVPERAFGTPPGINAPRQHFEIGEALGQMDFERAAKVSGARFVYLKADLARLERALANFMLDIHTGTFGYTEVNPPVLVRDSAMFGTGQLPKFYNDQFAAYQEPDLRANFKKDMEAALANIKGIAKQVPLDEIKDFTVGKIKDDPTRFWLVPTA