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SCNpilot_cont_1000_p_scaffold_8750_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(3106..3309)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPB2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 65.0
  • Bit_score: 101
  • Evalue 3.60e-19
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EHK57384.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 65.0
  • Bit_score: 101
  • Evalue 5.00e-19
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 65.0
  • Bit_score: 99
  • Evalue 4.30e-19

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGACCATCGGCACCGTGAAGTTCTTCAACGCCTCCAAGGGCTTCGGATTCATCTCGCCCGAAGGCGGCGGCAAGGACGTGTTCGTCCATATCAGCGCCGTCGAAGCGGCGGGCATGCGCACCCTCAACGAAGGCCAGAAGGTGAATTTCGACATTCAGCCGGATGCGCGCGGCTCCAAGGCCGCCAATCTCTCGGCGATCTAA
PROTEIN sequence
Length: 68
MTIGTVKFFNASKGFGFISPEGGGKDVFVHISAVEAAGMRTLNEGQKVNFDIQPDARGSKAANLSAI*