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SCNpilot_cont_1000_p_scaffold_3554_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(1554..3365)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 548.0
  • Bit_score: 430
  • Evalue 2.30e-117
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDO59281.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 451.0
  • Bit_score: 456
  • Evalue 4.20e-125
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 548.0
  • Bit_score: 430
  • Evalue 7.20e-118

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
ATGCAACGCAAGGCGCGGGCCACCGTGCCCTGGCCCCTCCGGAATTTGCGCTTTCTTAAGTCCGCGCCCGGCATAGTGGCTGCCAAGCTATGGACCGGAGAAACCGGCCGGGGATGGTGGATTGTGTTGAATGCCGCATTGCAGCAGCCGGAAGAAGTCCGCCAGCGGCTTATTGCGCTGGAAGATGAGCTGCGCCTGAAGCTTGCGATCCAGTCGGCGGGATGTGCCGTTTTCGATTGGGACGTGGAGGCCGACACCATCCGCTGGGAGGGCGCCACCGACATCCTGCCGCTCCACCTGGATCATTCCTGCGCCAGCAATTTCCTGGACGGGATCGTCGCCGACAAGCGCCGTCAGCTCCTGTCCATCCTTGAGGCATCGTCGTTCCAGCCAACCCACTTCGATATCGATATCGAGGTCGCCGCCGCCCTGGGCGCGGTCGGCTTCACCATCACAGGCACCCGCACGCCGGGCGATGGCGGCCGCACCGCGCGGCTGGTCGGCGTGATCCGCGAGAATACCGAGCGCGCCCGCGAAATCCAGCGCCTGACCTACCTGGCCACGCGAGATGAATTGACGGGTCATCTCAACCGCAACGCGCTGCGCGAAGAACTGTCGCAGGCCATCGAGAGAGCCAAGGAAGAGAACCGCTCCTGCGCGTTTCTGGTCGCCTCCATAGACAGGCTGGCGATGATCAATGACGGCTTCGGCTTCGACGCCGGCGAAGAAGTCATCATGGGCGTGGGCGAGCGCCTGTCGCGCACCCTGCGCGGCAGCGATATCATCGGCCGCATCGCCGGCAACAAGTTCGGCGTGATCCTGAAGAACTGCCGCGAGCAGGAAATTGCCGTGGTCGCCGCGCGCCTGCGCGCGGCGGTGCGCGGCAACGGCATCGAAACCCGCAGCGGTCTGGTTGCCGCCACCTGCTCCGTGGGCGCGGTGTGGCTGCCCGCGGCGGCGTCCAGCAGCCAGGAAGCCATGCTGCGCGCCGAACAGGCACTCAACCGCGCTCGCGCCAACGGCCGCGACGGCTTTGCCGTATATCATCCGTCCCCCAGCCGCGAGACTTTCCGCCTGCGCCAGATGGCCATCGCCGACGAGGTGGTCCAGGCGCTCAGGGAAAACCGCCTCAAGCTGGCTTATCAGCCAATCATCCATGCCCGCACCCGCAAGGTCAGCCATTACGAATGCCTGCTGCGCCTGGTCAAGGCGGACGGCTCCATCCTCACCGCCGGCCATTTTGTGCCCGCCGCCGAGCAGATGGGCATCGTGCACATGATCGATCGGTTCGCCCTGGAAACCACCATTGGCCTGCTGAAGGCCAACCCGGGGATCAGCCTGGCGGTGAATGTGTCGGGCACCGCCGCCACCGACCCGGCCTGGCTGCAGTCCTTCATCGACTATGTCCATGCCGCCCGCGACGTCGCCAAACGCCTGATCGTGGAGCTCACCGAAACCGCGGCCCTGCACCATTTCGAGGAGAATGCCCATTTCGTCTCCCAGTTGCGCGAACTGGGCGCGCGCGTGGCGATCGACGATTTCGGTGCCGGCTATACCAGTTTCCGCAACCTGCAGATGCTGCATGTCGATGCGGTCAAGATCGACGGCTCCTATGTAAAGGATCTCAGCCTCTCGCCCGAGAACCAGGTCTTCGTGCGCACCCTGGTGGGCCTGGCGAAGAACTTCCACATCAAGACGGTAGCCGAATGGGTGGGCTCCGATGCCGATGCCGCTCTGCTGCAGAGCTTCGGGGTCGACTATTTCCAGGGCTTCCATTTCGGCGAGCCCACGCTGGAGCCGAATTGGGACTGA
PROTEIN sequence
Length: 604
MQRKARATVPWPLRNLRFLKSAPGIVAAKLWTGETGRGWWIVLNAALQQPEEVRQRLIALEDELRLKLAIQSAGCAVFDWDVEADTIRWEGATDILPLHLDHSCASNFLDGIVADKRRQLLSILEASSFQPTHFDIDIEVAAALGAVGFTITGTRTPGDGGRTARLVGVIRENTERAREIQRLTYLATRDELTGHLNRNALREELSQAIERAKEENRSCAFLVASIDRLAMINDGFGFDAGEEVIMGVGERLSRTLRGSDIIGRIAGNKFGVILKNCREQEIAVVAARLRAAVRGNGIETRSGLVAATCSVGAVWLPAAASSSQEAMLRAEQALNRARANGRDGFAVYHPSPSRETFRLRQMAIADEVVQALRENRLKLAYQPIIHARTRKVSHYECLLRLVKADGSILTAGHFVPAAEQMGIVHMIDRFALETTIGLLKANPGISLAVNVSGTAATDPAWLQSFIDYVHAARDVAKRLIVELTETAALHHFEENAHFVSQLRELGARVAIDDFGAGYTSFRNLQMLHVDAVKIDGSYVKDLSLSPENQVFVRTLVGLAKNFHIKTVAEWVGSDADAALLQSFGVDYFQGFHFGEPTLEPNWD*