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SCNpilot_cont_1000_p_scaffold_3085_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 2..523

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB086 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 171.0
  • Bit_score: 230
  • Evalue 1.30e-57
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:EMD84206.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 171.0
  • Bit_score: 225
  • Evalue 7.70e-56
secretion protein HlyD family protein; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 174.0
  • Bit_score: 217
  • Evalue 3.60e-54

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Taxonomy

alpha proteobacterium JLT2015 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGGCGCCTGTCGGTGGCGTCATCGCCCAGCGCACGGTGCAGGTTGGCCAGCACGTCAGCGCCGGCACGCCGCTGATGGCCGTTGTGCCGCTGGACGCTGTGTGGATCGACGCCAATTTCAAGGAAGTGCAGCTGTCGGACATGCGTGTCGGCCAGAAAGCGGCGGTGACGACCGACATCTATGGCAGCAGCGTGATTTATCATGGCCATGTCTCCGGGCTCGGGGCGGGGACCGGCAGCGCCTTTGCCATACTGCCGCCGCAGAATGCCAGCGGCAACTGGATCAAGATTGTCCAGCGGGTGCCGGTGCGCATCGCGCTCGACCCTGCGGAAGTGAAGGCACATCCCCTGCGCGTGGGCCTGTCGGTGTCGGTGGATGTGGCTGTGCGCGATACCTCGGGCCCGCTGGTCGCGGGCATGGCCGCTAAGTCCATGCGTGCCGATACCGGCGATGAGGCGGCCGCCACCATCGACGCGCAGGTGAAGAAGATCATCTCCGAGAACAGCGCAAGGGCGCCGTGA
PROTEIN sequence
Length: 174
VAPVGGVIAQRTVQVGQHVSAGTPLMAVVPLDAVWIDANFKEVQLSDMRVGQKAAVTTDIYGSSVIYHGHVSGLGAGTGSAFAILPPQNASGNWIKIVQRVPVRIALDPAEVKAHPLRVGLSVSVDVAVRDTSGPLVAGMAAKSMRADTGDEAAATIDAQVKKIISENSARAP*