ggKbase home page

SCNpilot_cont_1000_p_scaffold_7491_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(1253..1999)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 245.0
  • Bit_score: 336
  • Evalue 3.40e-89
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 248.0
  • Bit_score: 332
  • Evalue 8.40e-89
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036453AF similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 245.0
  • Bit_score: 335
  • Evalue 4.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCGCGCTATCGCCTGACCATCGAATATGACGGCGGCCCCTTTGTCGGCTGGCAAAGACAGGACAATGGCCCCTCCGTCCAGGGCGCGCTGGAAGACGCCATCGAGAAATTGTCGGCCACGCGCGTGACCGTTGTCGGCGCCGGCCGCACCGATGCGGGCGTCCATGCGCTGGGCCAGGTGGCGCATTTCGACTTGGACAGGGACTATCCGCCCGACAAGGTGCGCGATGCGCTGAACTATCACCTCAGGCCCGCGCCCATCAGCGTGCTGGAGGCCGCCGTCGCGGACGGGCAATTCCATGCCCGCTTCTCGGCCAGCGCGCGCCACTACCTGTTCCGTATCCTGAACCGGCGCAGCCCGCCGGCGCTGGAAAGGGGCAAGGTCTGGCATGTCGCTGTGCCGCTGGATGCTCCCGCCATGGGCGCGGCCGCGCAATACCTGGTCGGCAATCACGACTTCACCACCTTCCGCGCCGCCGAATGCCAGGCCCAAACGCCGGTCAAGACGCTGGACCGGCTGGAGGTCTTTCGCCGCGCCGACGAAATCCATATCGAAGCCAGTGCCCGCAGCTTTCTGCACCACCAGATCCGGTCCTTTTCCGGCACGCTGAAGCTGGTGGGCGAGGGCAAATGGCGGCCCCATGACGTGAAGAAGGCGCTGGAGGCGCGCGACCGCGCCGCTTGTGGCCCTGTCTCACCGCCCGACGGGCTCTATCTGGTGAAAGTCGACTACCCCCCGTGCTGA
PROTEIN sequence
Length: 249
MPRYRLTIEYDGGPFVGWQRQDNGPSVQGALEDAIEKLSATRVTVVGAGRTDAGVHALGQVAHFDLDRDYPPDKVRDALNYHLRPAPISVLEAAVADGQFHARFSASARHYLFRILNRRSPPALERGKVWHVAVPLDAPAMGAAAQYLVGNHDFTTFRAAECQAQTPVKTLDRLEVFRRADEIHIEASARSFLHHQIRSFSGTLKLVGEGKWRPHDVKKALEARDRAACGPVSPPDGLYLVKVDYPPC*