ggKbase home page

SCNpilot_cont_1000_p_scaffold_1653_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 13497..14021

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FUQ5_PHAMO similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 172.0
  • Bit_score: 202
  • Evalue 3.80e-49
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 172.0
  • Bit_score: 202
  • Evalue 5.40e-49
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 187
  • Evalue 3.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phaeospirillum molischianum → Phaeospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCTCCGGCGCGTGGCGGCGTTCCAGGACCGGCAGGCCTTCCAGGAACTGTTCGCGCATTTTGCTCCCCGCATCAAAGCCTATCTTGTCCGCGGCGGCACGGCCTCGCAGCAGGCGGAGGATCTTGCCCAGGAGGCGATGCTGGCGGTCTGGCGCAAGGCGGCACAGTTCGATTCGAACAGGGCATCGGCGGCAACCTGGATATTCACCATCGCCCGCAATTTGCGCATCGACATGCACCGGCGCGAGCGTCATCCCCGCTTCGATCCGGCCGATCCATTCTTCATGCCCGACAGTCCGGATCCGGCCGATTCGGCCTTGCAGACACGGCAGCGCGAGCACCAGTTGCGGAAGGCCATACAGGCGCTGCCGCCGGACCAATTTCGCATCGTCATGTTGTCATTTTTCTCCGAAAAGCCGCACAGCCAGATCGCGGCGGAACTGGACATTCCGCTGGGCACGGTGAAGTCCCGCATCCGGCTCGCAATGATGCGGCTGAAGACCCTGCTGGGGGACGAGTCATGA
PROTEIN sequence
Length: 175
MLRRVAAFQDRQAFQELFAHFAPRIKAYLVRGGTASQQAEDLAQEAMLAVWRKAAQFDSNRASAATWIFTIARNLRIDMHRRERHPRFDPADPFFMPDSPDPADSALQTRQREHQLRKAIQALPPDQFRIVMLSFFSEKPHSQIAAELDIPLGTVKSRIRLAMMRLKTLLGDES*