ggKbase home page

SCNpilot_cont_1000_p_scaffold_3242_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(5332..5712)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UAL8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 126.0
  • Bit_score: 131
  • Evalue 4.60e-28
Integrase family protein {ECO:0000313|EMBL:EGV18770.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 126.0
  • Bit_score: 131
  • Evalue 6.50e-28
Phage integrase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 102.0
  • Bit_score: 126
  • Evalue 8.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGTCGTTGACGAACACTGCCATTAAGGCGGCCCGCCCGCAGCCGAGGCCCTACAAGCTATTCGATGAGAAGGGGCTGTTCTTGTCGGTCGAGCCGACGGGTGGACGGCTGTGGCGCTTTAAGTATCGCTATAACGGCAAGGAGAAAAAGCTGGCGCTGGGAGCCTACCCGGACGTTGGTCTGAAGGAGGCACGCGAGAAGCGAGACGAGGCCCGAGCTCTGCTCGCCGCCGGTATCGACCCCGGTCAGAAAAGGAAGAGTGACAGACAGGCCCAGGTCCTACAGGCGGCCAATAAACGACACGTTCCCCGGCGTTCCCCAAATCCGTTCCTGCACGCCCGGAACAGGCGGTCAACCTTCGTTCCAGTCGACCTCACATAG
PROTEIN sequence
Length: 127
MSLTNTAIKAARPQPRPYKLFDEKGLFLSVEPTGGRLWRFKYRYNGKEKKLALGAYPDVGLKEAREKRDEARALLAAGIDPGQKRKSDRQAQVLQAANKRHVPRRSPNPFLHARNRRSTFVPVDLT*