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SCNpilot_cont_1000_p_scaffold_6639_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(2259..2879)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 201.0
  • Bit_score: 331
  • Evalue 1.20e-87
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 201.0
  • Bit_score: 324
  • Evalue 2.50e-86
3-isopropylmalate dehydratase small subunit n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M915_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 201.0
  • Bit_score: 328
  • Evalue 4.20e-87

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Taxonomy

Thalassospira sp. HJ → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGTCCGGCCCGCCATGGAACCATTCAAGAAACTCGAAGGGGTCGCGGCCCCGCTCAACATGATCAATGTCGACACCGACATGATCATCCCCAAGCAATTCCTGAAGACCATCCAGCGCACCGGCCTTGGGCAGGCGCTGTTCGACGAGATGCGCTACAACACCGACGGCAGCGAGAAGCCCGATTTCGTGCTGAACAAGCCGGCCTACCGCAAGGCGCAGATCCTGGTGGCGGGCGACAATTTCGGCTGCGGGTCGAGCCGCGAGCACGCGCCCTGGGCGCTGCTGGATTTCGGCATCCGCGCCGTGATCGCCCCCAGCTTTGCCGACATCTTCTATGGCAACTGCTTCAAGAACGGCATCCTGCCGATCAGGCTGCCGCAGGCGGAGGTCGACAAGCTGATGGACGATGCCGAGCGCGGTGCCAATGCCGTGATCACCATCGACCTGGAGGCGCAGGAGATTCGCGGCCCCGATGGCGGCTGCATCAAGTTCGAGGTCGATGAATTCAAGAAGCAGTGCCTGCTGAACGGCTGGGACGATATCGGCCTGACCATGCGTGCCGAGGACAAGATCGCCGCGTTCGAGAAGAACAAGGCCGTCCAGCAGCCCTGGATCTAG
PROTEIN sequence
Length: 207
MVRPAMEPFKKLEGVAAPLNMINVDTDMIIPKQFLKTIQRTGLGQALFDEMRYNTDGSEKPDFVLNKPAYRKAQILVAGDNFGCGSSREHAPWALLDFGIRAVIAPSFADIFYGNCFKNGILPIRLPQAEVDKLMDDAERGANAVITIDLEAQEIRGPDGGCIKFEVDEFKKQCLLNGWDDIGLTMRAEDKIAAFEKNKAVQQPWI*