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SCNpilot_cont_1000_p_scaffold_3505_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(8508..8924)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW84_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 138.0
  • Bit_score: 226
  • Evalue 2.00e-56
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 138.0
  • Bit_score: 226
  • Evalue 6.20e-57
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 138.0
  • Bit_score: 226
  • Evalue 2.80e-56

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGGTACCCAAATCCCGGCTGACTATCGGCCGTCGGAAAATGAGCCCTTTATGAATGAGCGTCAGCGCGAATATTTCCGGCGCAAGCTCAATCAGTGGAAAGAAGAAATCCTCAAGGAAAGCCGGGAGACCATCCAGAATCTGCAGGCGGAAACCGTGCCGCATGCCGACTTGGCCGATCGCGCCTCGACCGAGGCCGAGCGCCAGCTGGAACTGAGGACCCGCGACCGCCAGCGCAAGCTGATCGCCAAGATCGATTCCGCGCTTCGCCGCATTGACGATGGTTCCTATGGCTTCTGCGAGGAGACGGGCGAACCCATCTCGCTCAAACGGCTGGATGCGCGCCCCATCGCGACGCTGTCGATCGAGGCGCAGGAGCGCCATGAGCGGCGCGAAAAGGTCTACCGGGACGACTAG
PROTEIN sequence
Length: 139
MGTQIPADYRPSENEPFMNERQREYFRRKLNQWKEEILKESRETIQNLQAETVPHADLADRASTEAERQLELRTRDRQRKLIAKIDSALRRIDDGSYGFCEETGEPISLKRLDARPIATLSIEAQERHERREKVYRDD*