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SCNpilot_cont_1000_p_scaffold_3584_curated_21

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 17116..17499

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 138.0
  • Bit_score: 131
  • Evalue 8.60e-28
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 134.0
  • Bit_score: 127
  • Evalue 3.60e-27
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhodovulum sp. PH10 RepID=J5PKE9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 138.0
  • Bit_score: 131
  • Evalue 6.10e-28

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGCCCGCGTCACTGTCGAAGACTGCGTCGACAAGATCCCCAACCGCTTTGACCTGGTGCTGACTGCCGGGTTCCGCGCCCGCCAGCTTTCGGGCGGCGCCGAGCCCATGCTGGACCGCGACCGCGACAAGAACCCGGTCGTGGCGCTGCGCGAGATTGCCGCCCGGCTCATCAAGCCGGACGAGGCCAAGGAAGACTATATCCGCTCGCTGCAGAAGCATGCCGAGGTGGACGAGCCGGAGGAGGCCCGGCCCGAGTCCGACGACCGCGAGGATCCCTCGCACCGCCAGGTCACCGAGGAAGAGCTGCTGCGGGCCCTGACCACCGAGGCGCAGCGTCGCGCCGAACCCCAGCCGGAGCCGGAATCGGACTACGAGGAGTAA
PROTEIN sequence
Length: 128
MARVTVEDCVDKIPNRFDLVLTAGFRARQLSGGAEPMLDRDRDKNPVVALREIAARLIKPDEAKEDYIRSLQKHAEVDEPEEARPESDDREDPSHRQVTEEELLRALTTEAQRRAEPQPEPESDYEE*