ggKbase home page

SCNpilot_cont_1000_p_scaffold_4938_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 1947..2333

Top 3 Functional Annotations

Value Algorithm Source
Mammalian cell entry related domain protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LJB1_DINSH similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 115.0
  • Bit_score: 101
  • Evalue 8.90e-19
hypothetical protein; K02067 putative ABC transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 115.0
  • Bit_score: 101
  • Evalue 2.80e-19
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABV93133.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 115.0
  • Bit_score: 101
  • Evalue 1.20e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dinoroseobacter shibae → Dinoroseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGCGCAATCACAGTTTCTTCGATCTCGTCCTGGGGGCTGCCATCCTCTGCGTTGCCGTGGGCTTTCTGGTCTATATGCGGCTCCAGACCGGCATCGGTGGCCTCAGCTCCTATCCCCTCAATGCCGAGATGAGACGTGTCGACAGCCTGAAGGCGGGCGCCGATGTGCGCATCTCTGGCGTCAAGGTTGGTACCATCACCGGCCTGACCCTCAAGCATGGCGGCTATCGCGTGGATGTCAGCATGAACATCCGCCAGGGCATACCCATCCCCAGCGATTCGACCCTGGCGGTCAACTCGGGAATCATGAGCAGCAGCTATCTGAACATCCGCCCCGGCCATAGCGGCAAAATGCTGGTGCCCGGCGCCACGCTGCATTCGTCCTGA
PROTEIN sequence
Length: 129
MRNHSFFDLVLGAAILCVAVGFLVYMRLQTGIGGLSSYPLNAEMRRVDSLKAGADVRISGVKVGTITGLTLKHGGYRVDVSMNIRQGIPIPSDSTLAVNSGIMSSSYLNIRPGHSGKMLVPGATLHSS*