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SCNpilot_cont_1000_p_scaffold_2355_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 11942..12499

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5X7_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 3.80e-39
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 1.20e-39
Cold shock protein {ECO:0000313|EMBL:BAI76056.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 5.40e-39

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCATACGGCAACGAGGGTTCCCGGTCCATTTCGCAGGCATCCGCGAAGGGCAGGGTAAAATGGTTCAACCCCACCAAGGGGTACGGTTTCATCACGCTGGACAATGGAGGCGATGCCTTCTGCCACGCTTCGGCGCTGCAGGCCACCGGCCATGCGGATGTTCCGCCGGGCACCACCATTGTGTGCGACCTGGCGGATTCACAGCGCGGGCTTCAGGTCGTGGCGGTCCACAGCGTCGACACGTCGACCGCCGAGGCCCCCAGCCGCGGTCCGCGCCGCGACTTCGGCCATGGTGGTGGCTTCGGCGGCGGCGGCTGCTTTCATCACCGCGATAGCGGCCCTTCCGGCCCGATGGTCGAAGGCAAGGTCAAGTTCTTCAACGACCAGAAGGGTTTTGGCTTCGTGATGCCGGACAGCGGTTCGGGCGACATCTATCTGCACGCCAGCGCGCTACGGCGTTCGGGCATCCAGGCCGTCGAACCCGACCAGCGCATCCGCTATTCCACGCGCCAGGGCAACAAGGGCGTGGAAGTCGACCGGGTCGAAATCATCTGA
PROTEIN sequence
Length: 186
MAYGNEGSRSISQASAKGRVKWFNPTKGYGFITLDNGGDAFCHASALQATGHADVPPGTTIVCDLADSQRGLQVVAVHSVDTSTAEAPSRGPRRDFGHGGGFGGGGCFHHRDSGPSGPMVEGKVKFFNDQKGFGFVMPDSGSGDIYLHASALRRSGIQAVEPDQRIRYSTRQGNKGVEVDRVEII*