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SCNpilot_cont_300_bf_scaffold_616_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_3

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(1850..2734)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BW2_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 266.0
  • Bit_score: 224
  • Evalue 1.20e-55
ABC transporter permease {ECO:0000313|EMBL:KAJ32573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 262.0
  • Bit_score: 332
  • Evalue 5.80e-88
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 266.0
  • Bit_score: 224
  • Evalue 3.80e-56

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCGACCACGCTCTCCCGGGCGCGACGAAAGGCGAGAAGGGTGGCGAGCGGAGCCGGATCGGGCGCGGCGCCCTGATCGGCCTGGCGCCGCTCTTCCTGTTCCTGCTCGTCTTCCTGGTTGGCCCGATCTGGGTGAACCTGATCGAAAGCCTGAAGGAGCCCGGGGGCAGCCAAGGGCTGCAGCAGTATCTGCGCATCTTCGGCGACAGCTACTACCTGACGGTCATCGGCCAGACGCTCCTGTTCGGCCTGGGGGTCACCGTCGTCTGCATCCTGCTCGGCTATCCCCTGGGCTACGCCATCGCGCGCGCCCAGGGCGCCGCCAAGGCCGTGCTCATTCTCGTCGTCGTGACGCCGCTGATGGTCAATGTCGTCGTCCGCTCGTTCGGCTGGATGGTGATCCTCGGCGGATCGGGTGCGCTCAATGCCGGTCTCGTGGCGCTCGGCCTGCCCAAGCTCGAGTTGATGTACAACTGGACCGGCGTGACCATTGCGATGGTCCATGTCCTGCTTCCCTTCATGGTGCTGTCGATCGCCAGCACGCTCGAGACGCTCGACCGCCGTATCGAGGAAGCTGCCATGGTGCTGGGCGCGCCGCCGGCCCAGGTCTTCTACTACGTGACCCTGCCGCTCAGCCTTGAGGGGATCGTGACCGGCGCGATCCTGGTGTTCACCCTGGCGATCGGCAGCTTCGTCACCGTGCTGCTGCTCGGCAAGACGGCGACCATGGTGCTGCCGCTGCTGATCTACCAGCAGCTCACGGTCAGCTCGGACTGGCCGTTTGCGGCGGCGATGGGCATCACCTTGCTGGTCCTGGTCTCGTTCGTGCTGTGGCTGCAATCGTGGCTGCGCGGCGTCTCTGCGGCGCGGGGCGAACGATGA
PROTEIN sequence
Length: 295
MADHALPGATKGEKGGERSRIGRGALIGLAPLFLFLLVFLVGPIWVNLIESLKEPGGSQGLQQYLRIFGDSYYLTVIGQTLLFGLGVTVVCILLGYPLGYAIARAQGAAKAVLILVVVTPLMVNVVVRSFGWMVILGGSGALNAGLVALGLPKLELMYNWTGVTIAMVHVLLPFMVLSIASTLETLDRRIEEAAMVLGAPPAQVFYYVTLPLSLEGIVTGAILVFTLAIGSFVTVLLLGKTATMVLPLLIYQQLTVSSDWPFAAAMGITLLVLVSFVLWLQSWLRGVSAARGER*