ggKbase home page

SCNpilot_expt_500_bf_scaffold_573_curated_3

Organism: scnpilot_dereplicated_Armatimonadetes_1

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 621..1001

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031EC715 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 136.0
  • Bit_score: 129
  • Evalue 1.80e-27
RNA recognition motif-containing protein {ECO:0000313|EMBL:AIE83839.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 130.0
  • Bit_score: 136
  • Evalue 2.60e-29
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 143.0
  • Bit_score: 126
  • Evalue 6.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 381
TTGGCTAACAAAACACTTTACGTCGGCAATATTTCCTACTCCAGCACGGAGGAGTCACTCTCGCAGGCATTCGCAGAGTACGGCGCCACCAATGTTCGCATCATCGAGGGTCGCGGTTTCGCGTTCGTCGACGTCGATGCCGACAAGATGGAAGCGGCGATCGCGGATAAGAACGGCGCTCAGCTTGAGGGTCGCAACCTGACCGTCAATGAGGCTCGTCCCCGAGAGGATCGAGGTCCTCGAAGCGGCGGCGGTGGCGGTGGCTACGGCGGCGGCCGATCGGGCGGTGGCGGAGGCTACGGCGGTGGTCGATCGGGTGGCGGTCGTTCGGGCGGCGGTGGCCGATCCGGTGGCGGCGGCTACGGCGGCGGTCGCTGGTAA
PROTEIN sequence
Length: 127
LANKTLYVGNISYSSTEESLSQAFAEYGATNVRIIEGRGFAFVDVDADKMEAAIADKNGAQLEGRNLTVNEARPREDRGPRSGGGGGGYGGGRSGGGGGYGGGRSGGGRSGGGGRSGGGGYGGGRW*