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SCNpilot_expt_1000_bf_scaffold_112_curated_23

Organism: scnpilot_dereplicated_Bacteroidetes_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: 30831..31508

Top 3 Functional Annotations

Value Algorithm Source
DeoR family transcripitonal regulator n=1 Tax=Cytophaga aurantiaca RepID=UPI00036E6758 similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 225.0
  • Bit_score: 232
  • Evalue 5.90e-58
Uncharacterized protein {ECO:0000313|EMBL:ETZ24611.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 225.0
  • Bit_score: 231
  • Evalue 1.40e-57
helix-turn-helix type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 225.0
  • Bit_score: 228
  • Evalue 2.70e-57

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGAATCGCGTTGACAGATTAGTTGCTATATTAACCACCATACAGTCAAAGAGGTTTGTAACATTAGAATATATTGCTGATAAATATCAAATCAGCGAACGTACAGTTTACAGGGATATCAAAGCATTGGGAGAGATTGGCGTTCCCGTCAATTTCGAGAACAATAAGGGTTATTCTATCCCGAAAGAATACTTTCTCCCACCTGTTACGCTTACAAGCGAAGAGGCAAACGCTTTAATATTAGTAGCAAAGCTGTCAGAAAGATATACTGATAGAACCATTCAAAAGAACGTGACCAATGCGCTGGATAAGATCAAATCGGTGCTGCGTACGGTTGAAAAAGATAAAGCGGATCAACTACAAGATCTGATAGGTGTTTTTACGTCTGCTAATGTTGAGAACAAGGATTATCTGACAGAAATACAGAATTCAATACTTAACAGGCAGGTACTGGATATAGAATATGTAAACAACAATGAAGAGAAAAGCTGCAGGCAGGTAGAGCCCATCGGCCTAAAATTTTACTCTAACCAGTGGCACTTGATAGCCTGGTGCTGGTTACGAAATGAGTACCGCGATTTCAAAGTGTTGCAGATACAGAGTTTAAAAAATACTATGCAGCCTTTTAAGAAAACTGAGCATATCAGCCTCGAAGCATACGTTCAGTCACTGGTATGA
PROTEIN sequence
Length: 226
MNRVDRLVAILTTIQSKRFVTLEYIADKYQISERTVYRDIKALGEIGVPVNFENNKGYSIPKEYFLPPVTLTSEEANALILVAKLSERYTDRTIQKNVTNALDKIKSVLRTVEKDKADQLQDLIGVFTSANVENKDYLTEIQNSILNRQVLDIEYVNNNEEKSCRQVEPIGLKFYSNQWHLIAWCWLRNEYRDFKVLQIQSLKNTMQPFKKTEHISLEAYVQSLV*