ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1921_curated_17

Organism: scnpilot_dereplicated_Bacteroidetes_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: comp(10699..11931)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000363644C similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 380.0
  • Bit_score: 244
  • Evalue 2.10e-61
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 404.0
  • Bit_score: 236
  • Evalue 1.40e-59
Integrase family protein {ECO:0000313|EMBL:AFK04136.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.6
  • Coverage: 404.0
  • Bit_score: 236
  • Evalue 6.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1233
ATGAAGCAAAGAAACAATTCCGTTCACGTACATTGGGACAAACGCTATCCCAAGAAAGGAACCACCCTCTGTCCTATTCAATTGGGGATCAATATAAACGGTTTACAATTTAAGATCGGATTGAAGTTATATGCCACGAGAGAGGACTTTGGCAAAGCGATGAGCGGCAAGAGTGGCAGTAAAGAAGTAAAAGAGTTACGGTCGCAAATCAGCACATACATATCTAAGGCAGAAGCGACATTAGACAAATTGCTTAATCCTACACGAGAATCATTCCAGCGTCTCTTTAAATCTGAAACAGATCTATCGACATCAAACAAAACAGATGTCACCTTCTTATTCCAGGAATACATAAATAACCTTCATTCAGAAGACAGGATAAAGACAGCTCAGAATCTGGAGTATGCATTAAAGTCCTTTAAGCGATATAAGTCGCCGCTATATTTCGAGGACATCAACGAATCCTTCTTGAAAGGCTATAAGGCGTGGATGAGTCACAATGGGAATAGTAGTACAACCGCACAAATATATATGCGTAACCTACGCACGATCTTTAATAAGGCCATTAAGGACGGCTTTATATCCAAACGCTTCTACCCTTTCAATGACTACTCAATTGGCACATCTGTCAAATCTAAGAATGTCCTGTATCCTGAACAGGTACAACAGTTGTTTGCATACCAACCGACAACATTGAGGTCAAGGCGTGCGAAAGACTATTGGATGTTCTGTTACCTGTGCAACGGCATCAACTTCAAAGACCTTGTTTATATGAAGCATAAGAGTATTAAAGGAGATACAATCGCATTTGTAAGGGAGAAGACCAAACTGACAAATACTGTTGCCGACAAACAGATACGCGCGTATTTACATCCCGAACTAAAGCGCATCATTGAAACATGGGGCGTGAAAAGCAATGACCCTGACGATTATATATTCCCTATACTGCATGGTTACAATAGCGTTATAGATAAAGAGAAACGCAGGAAGATGATACAGCGGCAGGTAAACGATAAGCTAAAACTGATCGGCGAGGAACTTGGCCTTTCAACTCCATTGATATTAAACCTTGCGAGGCATTCATTCAGTACAAATCTGAAGCTGAGCGGAACGCCTACATCTTTTATCACTGACGCTTTAGGACATGCAGACGGAAAGATCACTGAACATTACCTCAAAACTATACCTGATCAAAAGATAAAGGAACTATCAAAATCACTATTAAACTTCTAA
PROTEIN sequence
Length: 411
MKQRNNSVHVHWDKRYPKKGTTLCPIQLGININGLQFKIGLKLYATREDFGKAMSGKSGSKEVKELRSQISTYISKAEATLDKLLNPTRESFQRLFKSETDLSTSNKTDVTFLFQEYINNLHSEDRIKTAQNLEYALKSFKRYKSPLYFEDINESFLKGYKAWMSHNGNSSTTAQIYMRNLRTIFNKAIKDGFISKRFYPFNDYSIGTSVKSKNVLYPEQVQQLFAYQPTTLRSRRAKDYWMFCYLCNGINFKDLVYMKHKSIKGDTIAFVREKTKLTNTVADKQIRAYLHPELKRIIETWGVKSNDPDDYIFPILHGYNSVIDKEKRRKMIQRQVNDKLKLIGEELGLSTPLILNLARHSFSTNLKLSGTPTSFITDALGHADGKITEHYLKTIPDQKIKELSKSLLNF*