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SCNpilot_cont_300_bf_scaffold_5345_curated_1

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 2..583

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVG9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 193.0
  • Bit_score: 368
  • Evalue 5.90e-99
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 193.0
  • Bit_score: 368
  • Evalue 8.20e-99
RNA polymerase, sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 193.0
  • Bit_score: 328
  • Evalue 1.60e-87

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ACCGACACCCTGCCCCGCCTGCTGGTCGACAAGCGCTATCACGCCGTAGTGGCGGCCGGCGCGCGTTCGGACACGGAGAAGACCTTCGTCGCCGACTGCGCGGCCCAGGCCAGTTGGCTGGTCAAGTCGCTGGATCAGCGCGCCCGCACCATCATGAAGGTGGCGTCTGAGATCGTGCGCCAGCAGGACGCCTTCCTGGCCTTCGGCGTCGAGTTCCTGCGGCCCCTGACACTGAAGACGGTGGCCGAGGCCATCGAGATGCACGAATCGACGGTCAGCCGCGTGACCTCGAACAAATACGTGGCCACCCCGCGCGGAGTGTTCGAGCTGAAGTTCTTCTTCACCGCCGCCATCCAGTCCAGCGACGGCGGCGCGGCCCACTCGGCCGAAGCCGTGCGCCAGCGAATCAAGACCATGATCGACGGCGAATCCGGCGACGGCGACGTGCTGAGCGACGACCGCATCGTGGAGATTTTGAACGAGGCGGGAATCGACATCGCGCGGCGCACTGTGGCGAAATATCGCGAGGCCCTGCGCATTCCCTCGTCGATCCAGCGCCGCCGCCTGATGAAGGCCGGCTGA
PROTEIN sequence
Length: 194
TDTLPRLLVDKRYHAVVAAGARSDTEKTFVADCAAQASWLVKSLDQRARTIMKVASEIVRQQDAFLAFGVEFLRPLTLKTVAEAIEMHESTVSRVTSNKYVATPRGVFELKFFFTAAIQSSDGGAAHSAEAVRQRIKTMIDGESGDGDVLSDDRIVEILNEAGIDIARRTVAKYREALRIPSSIQRRRLMKAG*