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SCNpilot_cont_300_bf_scaffold_1758_curated_4

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(3115..3867)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 250.0
  • Bit_score: 458
  • Evalue 7.80e-126
shikimate dehydrogenase substrate binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 250.0
  • Bit_score: 307
  • Evalue 5.00e-81
Shikimate dehydrogenase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZU9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 250.0
  • Bit_score: 458
  • Evalue 5.60e-126

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
GTGATCCACAACGCCTGGCTGGAGGCCGGCGGCGTCGACGGCGCCTACGTCGCCTCTGCGCCCAAGGATGCGGCGGGGTTCGAGGCCCTGGTCGCGGCGGGTCGCGCGGGGCTGATCGCCGGGGTCAACGTCACGGCGCCGTTCAAGGAGCAGGCCTTCGCCCTGGCGGATGAGGCTGCGGCGGCTGCGCAGATGACGGGATCGGCCAACATCCTGGTTTTCGAGGACGGCCGGGTGCGGGCCGACAGCGCCGACGGCGCGGGCGTGCTCTACGCCCTGGCCGAACAGGCGCCGAAGCTGAAGCTGGACGGCGCTAGCGTCGTCATGCTGGGCGCTGGCGGCGCGGCGCGGGCGGGCGCCGGCGCGCTGATCGAGGCGGGCGCGGCCCTGTCCATTCTCAACCGCACGTGGGAACGGGCCGAGGCGCTGGTCGCCGATCTCGGTCCGGCGGTGTCGGTGGCCCCGGACGCGGGCGTGCTGGAAGGCGCGGATCTGGTCATCAACGCCCTGAGCGTCGCGCCGGACATTTCGTTGGCGGCGCTGAAGCCTTCGGCCGTGGTCATGGATATGACCTACAAGCCCGTGGTCACGCCTCTGTTGGCGGCGGCTCGCGCGCGAGGGCTGACGACGGTGGACGGGCTGGCCATGCTGATCGGCCAGGCGGCGCCGTCGTTCGAGGCCATCTTCCGCCGCCCGCCGCCGACGCTGGACCTGCGCGCCATCCTGCTGAACCATCTGGGAGAGACGGCATGA
PROTEIN sequence
Length: 251
VIHNAWLEAGGVDGAYVASAPKDAAGFEALVAAGRAGLIAGVNVTAPFKEQAFALADEAAAAAQMTGSANILVFEDGRVRADSADGAGVLYALAEQAPKLKLDGASVVMLGAGGAARAGAGALIEAGAALSILNRTWERAEALVADLGPAVSVAPDAGVLEGADLVINALSVAPDISLAALKPSAVVMDMTYKPVVTPLLAAARARGLTTVDGLAMLIGQAAPSFEAIFRRPPPTLDLRAILLNHLGETA*