ggKbase home page

SCNpilot_cont_300_bf_scaffold_17437_curated_1

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 1..1218

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Brevundimonas diminuta RepID=L1QSD9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 802
  • Evalue 2.00e-229
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:EGF94720.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 802
  • Evalue 2.70e-229
CagE TrbE VirB component of type IV transporter system conserved region; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 396.0
  • Bit_score: 637
  • Evalue 3.40e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
GTCTGGTCCGGTCCCGTTCGAAACGTCCATCTCGACGGCCCGCCGCTTCTCTATGCGGAGACGAGCGGGGCGACGCCGTTCAGGCTGTCGCCCCATGTCGGCGACGTCGGCCACATGCTCATCGTCGGACCGACCGGCGCGGGCAAGTCGGTGCTGTTGGCGCTGCTCGCCCTACAGTTTCGCCGCTACGCCGGATCGCAGATCTATATCTTCGACAAGGGGCTGTCGGCGCGGGCGGCGACGCTGGCGATGGGCGGCGACCATATCGCGCTCGGGGAGGGGGACGCGCTGGCGTTCCAGCCGCTCCGCGACATCGACGACGACGCCGAACGCGCGTGGGCCGCCGACTGGATCGCCGAACTTCTCAGCCATGAGAAGCTGATCATGACGCCGGAGCTGAAGGAGATGCTCTGGTCGGCGTTGACGAGCCTTTCCAGCGCGCCGTCCGAGGAGCGCACCCTGACCGGGTTGTCCGTCCTGCTGCAATCCCAGGCGCTGAAATCCGCGCTCGCGCCGTGGACGCTGGAAGGTCCGTTCGGACGACTGCTCGACGCCGCCGAAAACCGGCTGACGCTCACCGACGTGCTGTGTTTCGAGACCGAAACCCTGATGGACACGCCCAGCCTTGTCCTGCCCGTGCTGAGTTATCTCTTCCATCGCCTGGAAGCCCGGTTCGACGGTCGTCCGACCCTGCTCATCCTCGACGAAGCCTGGGTCTATCTCGATAATCCGACTTTCGCCCAACGCATCCGCGAATGGCTGAAGACGCTCCGAAAGAAGAACGTCAGCGTCGTCTTCGCCACGCAGTCGCTGGCGGACATCGCCGACAGCAGCATTGCGCCGGCCATCATCGAAAGCTGCCCGCAACGCATCTTCCTTGCGAACGACCGGGCCGTCGAGCCGCAGTCCCGCGCCGCCTATGAACGCTTCGGCCTGAACGAGCGTCAGGTGGAACTCATCGCCCGGGCGACGCCCAAGCGGCACTACTATCTCCAGTCGCGCGGCGGAAACCGGCTGTTCGAACTTGCACTCGGCCCGGTCGCGCTCGCGCTTTGCGGCGCGTCCGACCCCGCGACGCAAGCCTTGATCGACGACCTCCTGAAAGCACCGGGGCCCGACGCTTTCGGCGCGGCCTTCCTGCGCGAGCGCGGCCTTGCCTGGGCCGCCGACCTCCTCAGCGATTTTCCCGGCGCGGCTGAAGCCGCGCCATTCAACTAG
PROTEIN sequence
Length: 406
VWSGPVRNVHLDGPPLLYAETSGATPFRLSPHVGDVGHMLIVGPTGAGKSVLLALLALQFRRYAGSQIYIFDKGLSARAATLAMGGDHIALGEGDALAFQPLRDIDDDAERAWAADWIAELLSHEKLIMTPELKEMLWSALTSLSSAPSEERTLTGLSVLLQSQALKSALAPWTLEGPFGRLLDAAENRLTLTDVLCFETETLMDTPSLVLPVLSYLFHRLEARFDGRPTLLILDEAWVYLDNPTFAQRIREWLKTLRKKNVSVVFATQSLADIADSSIAPAIIESCPQRIFLANDRAVEPQSRAAYERFGLNERQVELIARATPKRHYYLQSRGGNRLFELALGPVALALCGASDPATQALIDDLLKAPGPDAFGAAFLRERGLAWAADLLSDFPGAAEAAPFN*