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SCNpilot_cont_300_bf_scaffold_31583_curated_3

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 909..1250

Top 3 Functional Annotations

Value Algorithm Source
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 105.0
  • Bit_score: 95
  • Evalue 1.00e-17
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000368B389 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 111.0
  • Bit_score: 113
  • Evalue 2.00e-22
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 110.0
  • Bit_score: 114
  • Evalue 7.40e-23

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Taxonomy

Brevundimonas nasdae → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGACGCCCGAGGCGTCCGATGCGGCCAGCGCCCGCAACCAGGCGACCCTGGCCGCCGCCCTGCCTGCCCTCGCCGAGGCCGTGGATCAGGCCCCCGCCGAGGCGCGCGGCCGCCGGGTCGCCGTGCGGGCCACGACGCCCGACCGCCTGCCGCTGTGCGGCGCCTGGGGCGAAGCCGGTCTGTACGTCCTGACGGGGCTGGGCTCGCGCGGCTTCTGCGTCGCCCCGCTGCTGGGCGAGCACCTGGCGGCGCTGATCATGGGGCGGTCATCTCCCGTTCAGCTCGACCATGGGCATCGTCTGAGCCCTGCGCGTCATGACAATGTCGCTGAAGACCACTAG
PROTEIN sequence
Length: 114
MTPEASDAASARNQATLAAALPALAEAVDQAPAEARGRRVAVRATTPDRLPLCGAWGEAGLYVLTGLGSRGFCVAPLLGEHLAALIMGRSSPVQLDHGHRLSPARHDNVAEDH*