ggKbase home page

scnpilot_p_inoc_scaffold_1776_curated_20

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(17629..18135)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQP6_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 167.0
  • Bit_score: 282
  • Evalue 3.70e-73
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 167.0
  • Bit_score: 282
  • Evalue 1.20e-73
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EZP48941.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 167.0
  • Bit_score: 282
  • Evalue 5.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGTCCGCCCCTTCCCCCGCCGACCCCGTCCACACGCTCTACGCCGACCACCATGACTGGCTGCGGGGCTGGCTGCGCCGCCGGCTGGGCGACGCGCACCAGGCCGCCGACCTGGCGCACGACACCTTCGTGCGCGTCATCGCCGGGCGGCAGGCCGGCGCCATCCAGGAGCCGCGCGCCTACCTCACCACGCTGGCGCAGCGCGTGCTCTGCCACTTCTGGCGCCGGCGCGAGCTGGAGCAGGCATGGCTCGACGCCCTGGCCACGCTGCCCGAAGAACTCGCCCCCTCGCCCGAGGACTACGCCCTGGTGCGCGAGGCCGTCGAAGCGCTCGACCAATACCTGGGCGCCCTGCCGCCCAAGGTGCGCCAGGTCTTCCTGCTGCGCCGGCTCGACGGCCTGAAGCACGCCGAGATCGCGCGTGCCACGGGCCTGTCCGTCGCCACGGTGGAGCGCTACATGAAGCAGGCCCTGGTGCACCTGTGCACCCAGCCCGACGCGCCGTGA
PROTEIN sequence
Length: 169
MSAPSPADPVHTLYADHHDWLRGWLRRRLGDAHQAADLAHDTFVRVIAGRQAGAIQEPRAYLTTLAQRVLCHFWRRRELEQAWLDALATLPEELAPSPEDYALVREAVEALDQYLGALPPKVRQVFLLRRLDGLKHAEIARATGLSVATVERYMKQALVHLCTQPDAP*