name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_988_curated_31
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33483..33842
|
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959187
Uncharacterized protein {ECO:0000313|EMBL:ENO77733.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_32 |
Not on your lists |
comp(33921..34712)
|
Metallo-beta-lactamase superfamily n=1 Tax=uncultured organism RepID=T1W7U4_9ZZZZ
Metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AGU10589.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative metal-dependent hydrolase of the beta-lactamase superfamily I
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_33
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34786..35940)
|
Putative lipoprotein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8N8_COLFT
nlpB; putative lipoprotein; K07287 lipoprotein-34
Putative lipoprotein {ECO:0000313|EMBL:AEK61511.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_34
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35937..36815)
|
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
dihydrodipicolinate synthase n=1 Tax=Herbaspirillum seropedicae RepID=UPI000317D8FE
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_35
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36843..37430)
|
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036E0F5E
Putative tellurite resistance protein {ECO:0000313|EMBL:ENO86912.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_36
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37626..40376
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWK4_9BURK
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFV95108.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
putative CHASE/GGDEF/EAL domain-containing signal transduction protein
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_37
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40367..41569)
|
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Tryptophan--tRNA ligase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZN93_9RHOO
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_38
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41571..42221)
|
Putative integral membrane transmembrane protein id=1348881 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
peptidase M50
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_39
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42285..42944)
|
translation factor Sua5 n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034AC255
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_40
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42941..43858)
|
phosphoesterase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F129F2
hypothetical protein; K07053
Uncharacterized protein {ECO:0000313|EMBL:CAQ69141.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_41
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43855..44760)
|
alpha/beta hydrolase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000370EC68
Alpha/beta hydrolase {ECO:0000313|EMBL:KGF81530.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_42
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44812..46482
|
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030E17D6
AMP-binding protein {ECO:0000313|EMBL:KIF80851.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_43
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
46515..47516
|
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHV3_METPP
Uncharacterized protein {ECO:0000313|EMBL:EWS53114.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein; K09151 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_44
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
47596..48132
|
Transferase hexapeptide repeat protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQM4_9RHOB
Transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEB85980.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
putative transferase
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_45
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48223..48567)
|
Cell division protein FtsB n=3 Tax=Thauera RepID=C4ZJN7_THASP
septum formation initiator; K05589 cell division protein FtsB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_46
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48598..49881)
|
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
enolase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DBEBC9
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_47
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(49878..50177)
|
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM75_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72509.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50202..51053)
|
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000363F186
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_49
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51061..52752)
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
CTP synthase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWL7_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_50
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(52776..53795)
|
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000371715F
czcD2; putative cobalt-zinc-cadmium resistance protein; K03295 cation efflux system protein, CDF family
Putative cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:CAL94035.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_51
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53917..54618
|
lpsI; 3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:CAP42128.1}; EC=2.8.3.5 {ECO:0000313|EMBL:CAP42128.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036EAFC3
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_52
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54630..55283
|
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:KCB37896.1}; EC=2.8.3.- {ECO:0000313|EMBL:KCB37896.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
3-oxoacid CoA-transferase subunit B 1 (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
3-oxoacid CoA-transferase subunit B 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F5Z4_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_53
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(55301..55720)
|
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=5083690 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative Thioesterase
Tax=GWE1_Burkholderiales_65_30_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_54
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55777..57060
|
Uncharacterized membrane-anchored protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AB14_ALKEH
hypothetical protein
Uncharacterized membrane-anchored protein {ECO:0000313|EMBL:ABI55973.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_55
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57110..57883)
|
Gluconate 5-dehydrogenase oxidoreductase protein n=3 Tax=Ralstonia solanacearum RepID=F6G1D8_RALS8
idnO; gluconate 5-dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AJW46329.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_56
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
58053..59702
|
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:ETY77213.1}; EC=1.5.5.1 {ECO:0000313|EMBL:ETY77213.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JK26_BURP8
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_57
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(59687..61087)
|
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI0003821D84
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_58
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(61084..61800)
|
Winged helix family two component heavy metal response transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YM83_9RHOO
copR; two component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
SCNpilot_expt_1000_bf_scaffold_988_curated_59
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
61905..62747
|
hypothetical protein id=12551059 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|