ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1133_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11241..12215

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein upf0065 n=2 Tax=Bordetella bronchiseptica RepID=K4T889_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 312.0
  • Bit_score: 360
  • Evalue 2.10e-96
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KDD64722.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 312.0
  • Bit_score: 360
  • Evalue 2.90e-96
protein bugT-like similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 318.0
  • Bit_score: 318
  • Evalue 2.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGATGAAAAGGCTGGCTTCAGCCTTCTATGGACTGGCGGCACTGGCGCTGTCTGCAGGGGTATCGGCGCAAACTTCGGCATACCCCTCGAAACCGGTCAGGATCATGGTGCCGTACGCGGTCGGCGGCATCGCCGACAACATCGCACGCGTGATCGGCCAGAAGCTCACCGATGCATGGGGGCAGCCCGTGGTCGTCGAGAACCGCGCGGGGGCCGGCGGCAACATCGGCACCAGCGTCGTGGCGGGCTCGGCGCCTGACGGCCACACACTCGTCATGGGGAACATCGGTACGCACGCGGTGAACCAGTACCTGGTCAAGAACATGCCGTTCGATCCGATCAAGGACTTCGTACCGATCGTGCACGTGCTCGACCTGGAGGGGCTGCTCGTCGTCAACTCGTCGGACTCGATCAAGACCGTCGCCGAGCTGATCGCGCTCGCGCGTTCGCAGCCCGGAAAGCTGACCTACGCATCGGCCGGATTGGGGACGACGAGCCATCTGGCCGGGGAGCTGTTCAAGTCGATGGCGAAGGTCGACCTGGTGCATGTCCCGTACAAGGGGAACCAGCCCGCGATCGCCGACCTCGTCGGCGGGTTGACCAACCTGGCCTTCGCGACGATGCCGACCGTGCTGCCGCGAGTGAAGGAGGGACGGCTGAGGGCGATCGCCGTCATCGGCACGTCGCGCGCGCAGGCGCTGCCCGACGTTCCGACGGTCGGCGAGACGTTGCCCGGTTTCGCCGTCAGCAACTGGATCGGCCTGTTCGCCCCGGCCGGCACACCGGCCGAGATCGTCGCGAAGATCCACGCCGAAGTCCAGCGCATCATGCAGACCCCGGAGGTCGCGAAGCGTCTGGAACCCGAGGGGGCCAAGTTCATTCCGATGTCGTCCGAAGCCTTCGCCCAGTTCCAGAAGAACGAGGCGATGAAGTGGTCGAAGGTGATCCGCGACGCGGGTATCCAGGCGCAGTGA
PROTEIN sequence
Length: 325
MMKRLASAFYGLAALALSAGVSAQTSAYPSKPVRIMVPYAVGGIADNIARVIGQKLTDAWGQPVVVENRAGAGGNIGTSVVAGSAPDGHTLVMGNIGTHAVNQYLVKNMPFDPIKDFVPIVHVLDLEGLLVVNSSDSIKTVAELIALARSQPGKLTYASAGLGTTSHLAGELFKSMAKVDLVHVPYKGNQPAIADLVGGLTNLAFATMPTVLPRVKEGRLRAIAVIGTSRAQALPDVPTVGETLPGFAVSNWIGLFAPAGTPAEIVAKIHAEVQRIMQTPEVAKRLEPEGAKFIPMSSEAFAQFQKNEAMKWSKVIRDAGIQAQ*