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SCNpilot_expt_1000_bf_scaffold_1800_curated_16

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12102..12668

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AP95_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 200.0
  • Bit_score: 121
  • Evalue 7.10e-25
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KIN88738.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 200.0
  • Bit_score: 123
  • Evalue 2.60e-25
type-F conjugative transfer system pilin assembly protein TrbC; K12059 conjugal transfer pilus assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 200.0
  • Bit_score: 121
  • Evalue 2.20e-25

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Taxonomy

Thauera sp. SWB20 → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCCGGCGCGTACTGAGATCCGCGCCGTCGCCGCGGTTGCCTGCGCGTTCGGCCTGCTCGGCGCCGGCATCGCGCTCGCCCAGGCGCCGCGCTGGCCCGATGCCGACGACATCGAGCGGGCACGGAAAGCCCACCCCTTCCCGCAAGCCGATCGTCTCGGTGCTCAACCGGTGCCCGCTCCGCCGCGCGTGAACCTGCCGTCGACTGCGGCACCCACCGACATCGAAGCGCTCGCCCGGGCTGGCGCACGTCTCGGCAGCCCCGGCGCGCAGACCACGGCCGCGAGCCCGCTTCGCATCTTCATCACCCTGGAGATGCCCCGCGCGAGCCTTCAGCTGCTGACCGATCAGGCCGCGCGCAGCGGCGCGGTCCTGGTGCTGCGGGGCCTGAAGGCGAACTCGATGCGCGAGACCCTCGCAGCCGTCTCCAGCCTGATCGGCGAGCGTCAGGTGGCCTGGGTGATCGACCCCGAAGCCTTCGCACGCCATCGCATCGAACGCGCGCCGACCTTCGTTCTGAGTCTCGACGATCGCGCCGACACGGCGACCAGCTGCGGCACGGACTGA
PROTEIN sequence
Length: 189
VPARTEIRAVAAVACAFGLLGAGIALAQAPRWPDADDIERARKAHPFPQADRLGAQPVPAPPRVNLPSTAAPTDIEALARAGARLGSPGAQTTAASPLRIFITLEMPRASLQLLTDQAARSGAVLVLRGLKANSMRETLAAVSSLIGERQVAWVIDPEAFARHRIERAPTFVLSLDDRADTATSCGTD*