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SCNpilot_expt_1000_bf_scaffold_650_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10080..10283

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=3 Tax=Herbaspirillum RepID=D8IP93_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 2.50e-28
cspD; cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 7.80e-29
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ62913.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 3.50e-28

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCAACAGGCACCGTCAAATGGTTCAACGACTCCAAGGGGTACGGCTTCATTACCCCTGACGATGGAGGGGAGGATCTGTTCGCGCACTTTTCCGCGATCCAGATGAACGGCTTCAAGACGCTCAAGGAAGGCCAGAAGGTCCAGTTCGACGTGGTCGCTGGTCCCAAGGGCAAGCAGGCCTCGAACATCAAGGAAAACTGA
PROTEIN sequence
Length: 68
MATGTVKWFNDSKGYGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVVAGPKGKQASNIKEN*