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SCNpilot_expt_1000_bf_scaffold_650_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14021..14992)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036D1168 similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 322.0
  • Bit_score: 288
  • Evalue 7.60e-75
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 315.0
  • Bit_score: 287
  • Evalue 4.10e-75
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 324.0
  • Bit_score: 423
  • Evalue 2.80e-115

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAAGAGACTGTTGCAACATCTGGGCGCGGTACTGCTGTGCGCCTTCGCTGCCGGCGCAATGGCGCAGCCGGGCTATCCGTCGCGGCCGATCAGGCTCGTCGTGCCCTATGCCCCCGGCGGCACCACCGACATCATGGCGCGAGTGCTGCAGGTGCCGATGCAGGAGGATCTCGGTCAGCCCATCGTCGTGGACAACAAGGCCGGCGCGGGCGGCGCGATCGGGATGAAGGACGCGGCCCATGCGGCGCCCGACGGCTACACGATCGTGTTCATCAACAACGGCCTGGTCGCGACCACCCCGATCCTGCAAAAGGGCGCCGGTTACGATGGATTGCGCGACTTCGCGCCGATCGGGATGGTCTCTTCCTCGCCGATGCTCGTCGTCGTCAACGGCGAGCTGCCGGTCGACGACCTGAAGGGGTTCATCGACTACGCGAAGAAGAATGCCGGCAAGCTCGAGTACGCCAGCGCCGGGCCCGGTTCGTTCGGCCACCTCTCCACCGAGCTGTTCCTGCGCGCTGCCGGGCTGCAGATGGTGCACGTCCCGTACAAGGGACAGGCGCCGACGCTGAATGCGGTGCTCGGCGGCGAGGTGAAGCTGCTCATCACCTCTCCCTCGTCGGCGATGAACAGCCATATCGCCTCGGGCAAGCTGAAATTGCTCGGCGTCGGCACGCCCGCGCGATCGCCGCTGTATCCGGACACGCCGACCGTCTCGACGGTCCTGCCGGGCTACCAGGCGGAGTCGTGGTTCGCGCTGCTCGCTCCCGCCGGCACGCCGCCCGACGTGATCGCGAGGCTGAACAAGTCGCTGAACAAGGCACTGGCGCTGCCGGACCTGCAGCAGCGGCTCAATACCTTCGGGCTGGTCGCGGTGTCCAGCACGCCCGAGCAGCTGCGCGAGCGCAACGTCGCCGAGGTCGAGCGCTGGGGAACGGTGATCCGGGAGGCCGGCATCAAGGCCGAGTGA
PROTEIN sequence
Length: 324
MKRLLQHLGAVLLCAFAAGAMAQPGYPSRPIRLVVPYAPGGTTDIMARVLQVPMQEDLGQPIVVDNKAGAGGAIGMKDAAHAAPDGYTIVFINNGLVATTPILQKGAGYDGLRDFAPIGMVSSSPMLVVVNGELPVDDLKGFIDYAKKNAGKLEYASAGPGSFGHLSTELFLRAAGLQMVHVPYKGQAPTLNAVLGGEVKLLITSPSSAMNSHIASGKLKLLGVGTPARSPLYPDTPTVSTVLPGYQAESWFALLAPAGTPPDVIARLNKSLNKALALPDLQQRLNTFGLVAVSSTPEQLRERNVAEVERWGTVIREAGIKAE*