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SCNpilot_expt_1000_bf_scaffold_650_curated_23

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 22513..23478

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmatic solute receptor n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LBR6_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 315.0
  • Bit_score: 300
  • Evalue 2.50e-78
bug; ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 315.0
  • Bit_score: 300
  • Evalue 7.80e-79
Extra-cytoplasmatic solute receptor {ECO:0000313|EMBL:ABF12410.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 315.0
  • Bit_score: 300
  • Evalue 3.50e-78

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Taxonomy

Cupriavidus metallidurans → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGGACGATTGCTTTCGCGCATGGCGGCGCTCGCCGCATTCGCAGTGCTTGCCTCGCCTCTCGCGCAGGCGCAGGACTGGCCGTCGAAGCCGATCAGGCTGGTCGTGCCCTATCCGCCGGGCGGCACGACCGACCAGATGGCCCGCATCCTGCAGCGCCAGCTCACCGAGAGACTCGGGCAACCGATCATCGTCGAGAACAAGGCCGGCGCCGCGGGCCTGATCGGCATCGAGACGGTCGCGCATTCCGCGCCCGACGGCTATACCCTGGCCTTCCTCAATACCGGGAACGTGATCGCGCAGGTCTTCAAGAAGGTGCCGTACGATCCGGTCAGGGACTTCCAGCCCATCTCGTTCGTGGCCACCTTTCCCCTCATCCTGTCGGTCCCCAATTCGCTGCCCGTCAACAACGTGCGGGACCTCATCGCGCTGGCGCGCACCAGGCCCGACCACATCAACTACGGCTCCACCGGAGTGGGCGGGTTCTCGCACCTCACCAGCGAGTACTTCAACGTGGCCGCCGGCATCAAGGCGACCCATGTGCCCTACAAGGGAGGCGCCCCCGGGGTCATGGCGCTTCGCTCCGGCGAGATCGAGATGATGTTCGTCACGCCGATCGACGGGGAGGCCCATCGGCGCGCCGGCGAGATCAAGTACCTCGGCCTGACCTCCACTGCGCCGAACGAGCTGCTCCCCGACGTACCTCCGATCGCCGACACGCTCCCGGGTTTCAACAGCGTGGTGTGGTTCGGAGTGCTCGCGCCGAGCGGCGTGCCGGCGAACGTGGTCGACAGACTCTCGTCGGCGATCGGTTGGGCAGTGCAGCAGCCCGACGTGAAGAGCAATTTCGCCAATCTGCGCGTGAATCCGGTCAGCAATACGCCGGGGCAGTTCCGCGACGTGATCAAGGCGGAAATCAGGCACTGGGCCGGCATCGTCAGGGAGGCGAACCTGAGCGCCGACTGA
PROTEIN sequence
Length: 322
MGRLLSRMAALAAFAVLASPLAQAQDWPSKPIRLVVPYPPGGTTDQMARILQRQLTERLGQPIIVENKAGAAGLIGIETVAHSAPDGYTLAFLNTGNVIAQVFKKVPYDPVRDFQPISFVATFPLILSVPNSLPVNNVRDLIALARTRPDHINYGSTGVGGFSHLTSEYFNVAAGIKATHVPYKGGAPGVMALRSGEIEMMFVTPIDGEAHRRAGEIKYLGLTSTAPNELLPDVPPIADTLPGFNSVVWFGVLAPSGVPANVVDRLSSAIGWAVQQPDVKSNFANLRVNPVSNTPGQFRDVIKAEIRHWAGIVREANLSAD*