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SCNpilot_expt_1000_bf_scaffold_371_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(15890..18235)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLP8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 734.0
  • Bit_score: 760
  • Evalue 1.30e-216
Type II and III secretion system protein {ECO:0000313|EMBL:EDM84929.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 734.0
  • Bit_score: 760
  • Evalue 1.80e-216
gspD; general secretory pathway protein d, type II secretion system; K02453 general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 813.0
  • Bit_score: 678
  • Evalue 2.60e-192

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Taxonomy

Limnobacter sp. MED105 → Limnobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2346
ATGGTGCGAATCCGGTGGCGGTGCGCGGCGGTGCTGGTGCTGATGCTCGTCGGCGCGGTCGCGCAGGCTCAGGTGGGCGCGGGCGCCGCGCCGCGCGCGGGCTCCGGCGCTGCGGCGCGCCCGGCCTCCGGCGCCGGCGACGCGGTGACGCTGAACTTCCGCGACGCCGACATCGACTCTGTGGTCGGCGCCTTCGGCCACCTGCTCGACCGCACCTTCGTGATCGACCCGCGGGTGCGCGGCAAGATGACGCTCGAGACGCCGCGGCCGGTCACGCGGGCGCAGGCGATGCAGCTGCTGCAGGCGGCGCTGCGCGCCCAGGGCTTCGCGGTGGTGGAGAGCGGCACGCTCACCAAGGTCGTGCCCGAGGCCGACGCCAAGCTGCAGTCGACGCCGGTGACCGCCGGCCGCCTGCCGTCGGCTGCCGGCGACCAGGTGGTGACGCAGATCTTCCGGCTCAACTACGAGTCGGCCTCCAACCTGGTGCCGGTGCTGCGCCCGCTCATCTCGCCCAACAACACCATCGTCGCCTACCCGAACAACAACTCGCTGGTGGTCACCGACTACGCCGCCAACCTGCAGCGCATCGCGCGCATCGTGGCCACGCTCGACAGCCCGTCGACCGGCGAGGTCGAGGTGGTGCCGGTGAGCAACGCGGTGGCCACCGACATCGCGGTCTCGGTGGCGCGCATGCTCGAGGATTCCGCGCGCGGCGCGCCCGGCGCGCAGGTCGACGCCGGCCAGCGGGTCACGGTGATGGCCGATCCGCGCATCAATTCGATCCTGGTGCGGGCCTCCAGCCCGTCGCGGCTGAACCTCGCCAAGAGCCTGATCGCGCGTCTCGACGTGCCCAGCGCGCGCCCGGGCAACATCAACGTGGTATACCTGCGCAACGCCGAGGCGGTGAAGCTCGCGCAGACCCTGCGCGGGGTGCTGGGCGGCGGCGAAGGCGGCAACGGCGGCGCGGCGAACGGGCCGCTGTCCACGGCGCAGACGCTGCCCGGGCAGCTGCCGCAGGGCTCGGCGCTCACCCCGACCGCCGCCAGCGCATCGATGCAGAGCGCCGCCACGACGCCGCTGCAGCCCTCGAGCAGCGCGCCGGTCACGGTGCAGGCGGGCGGGGCGATCATCGCCGCCGATCCGGCCACCAACTCGCTGATCATCACCGCCCCCGAGCCGGTCTACCGCAACCTGCGCGCCGTGATCGACAAGCTCGACGCGCGCCGCGCGCAGGTCTACATCGAGTCGCTGATCGTCGAGATCAGCGCCGACAAGGCCGCCGAGCTCGGCGTGCAGTGGCAGTTCCTCGGCTCGCCCCAGGGCACCACGCGCGCCTTCGGCGGCACCAACCTGACGGCGCGCGGCTCCGGCGCCAACATCCTCGACGTGGCGGCCAACCCGGCCTCGGCAGGCACCGGCCTGAACCTGGGCGTGGTGCGCGGCACGATCAACGTGCCCGGCGTGGGCGAGATCCTCAACCTCGGCTTCCTCGCGCGCGCGCTCGAGAGCGGCGCCAACGCCAACATCCTCGCCACGCCCAACCTGCTCACGCTCGACAACGAGGAGGCGCGCATCATCATCGGCCAGAACGTGCCCTTCATCACCGGGCAGTTCACCGCCACCGGCACCGGCGGCGCGTCGGTCAACCCGTTCCAGACGATCGAGCGCAAGGACGTCGGCACGACGCTGCGCGTCAAGCCGCAGGTGTCGGAGTCGGGGACGGTGAAGCTGCAGATCTTCCAGGAGGTCTCGAGCGTGCAGAGCACGTCGCTGGCCGCGGGCATCATCACCAACCGGCGCGCCATCGAGTCCAACGTGCTGGTCGACGACGGCCAGATCATCGTGCTGGGCGGGCTCATCGAGGAGCGCATCGACGGCAGCGTCGACAAGGTGCCCGGGCTGGGCGACGTGCCGGTGGTCGGCCAGCTGTTCCGCTACGACTCGCGCAAGCGCACCAAGACCAACCTGCTGGTGTTCCTGCGCCCGGTGGTGGTGCGCGACGGCGCCGACGCGCACAGCATCACCGCCGACCGCTACGACTACATGCGCGCCGTGCGCGGCGACGCGCAGCTGCCGCCGCACTGGGCGCTGCCCGACTACAAGGCGACGCCGCTGCCCGAGCTGCCGCCGGCGTCGCCGCGCGACGCCGACGCGCCGGCGCGCCCGTTGCCCAGGGGCAGCGGGCTGGCGCCCGTGCCCGCGGATTCCGCCGCCGCGGTGCCGCCGTCGCAGCCGCCGGCGCCGGTGTCGGCGTCGCGTCCGAGCACGGTGATCCAGACCGCGCCCAACGAGGTGGTGGTGCCGCTGCGCCCGGGCACCTCGCTGGCGCCGCCGGCTTCCGACTGA
PROTEIN sequence
Length: 782
MVRIRWRCAAVLVLMLVGAVAQAQVGAGAAPRAGSGAAARPASGAGDAVTLNFRDADIDSVVGAFGHLLDRTFVIDPRVRGKMTLETPRPVTRAQAMQLLQAALRAQGFAVVESGTLTKVVPEADAKLQSTPVTAGRLPSAAGDQVVTQIFRLNYESASNLVPVLRPLISPNNTIVAYPNNNSLVVTDYAANLQRIARIVATLDSPSTGEVEVVPVSNAVATDIAVSVARMLEDSARGAPGAQVDAGQRVTVMADPRINSILVRASSPSRLNLAKSLIARLDVPSARPGNINVVYLRNAEAVKLAQTLRGVLGGGEGGNGGAANGPLSTAQTLPGQLPQGSALTPTAASASMQSAATTPLQPSSSAPVTVQAGGAIIAADPATNSLIITAPEPVYRNLRAVIDKLDARRAQVYIESLIVEISADKAAELGVQWQFLGSPQGTTRAFGGTNLTARGSGANILDVAANPASAGTGLNLGVVRGTINVPGVGEILNLGFLARALESGANANILATPNLLTLDNEEARIIIGQNVPFITGQFTATGTGGASVNPFQTIERKDVGTTLRVKPQVSESGTVKLQIFQEVSSVQSTSLAAGIITNRRAIESNVLVDDGQIIVLGGLIEERIDGSVDKVPGLGDVPVVGQLFRYDSRKRTKTNLLVFLRPVVVRDGADAHSITADRYDYMRAVRGDAQLPPHWALPDYKATPLPELPPASPRDADAPARPLPRGSGLAPVPADSAAAVPPSQPPAPVSASRPSTVIQTAPNEVVVPLRPGTSLAPPASD*