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SCNpilot_expt_1000_bf_scaffold_430_curated_20

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22327..22686)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036B5BD0 similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 124.0
  • Bit_score: 96
  • Evalue 1.60e-17
hns-like transcription regulator protein; K03746 DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 120.0
  • Bit_score: 96
  • Evalue 8.40e-18
Putative hns-like transcription regulator protein {ECO:0000313|EMBL:CAP43083.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 120.0
  • Bit_score: 96
  • Evalue 3.70e-17

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCGCGTCGATCCTACGATTCCATCCGCAAGCAAATCGAGAAACTCGAGGCCCAGGCGAAGAAGCTGGAACAAGCCGCCGAGCAGCACAAGAAGCAGGCTGTGGCCCAGGTGGTTGCGCTCATGAGGAAGGTCGGCGTCACCATGGGCGACCTGGAAGCCACGCGTGAACGCGCCACGCGCTCGCGAGGCCGCGGCGCCGCGAAAGCGGGCGCCGGGAAGAAGGCCGCGAGGAAACCGGTACCTCCGAAATACCGCAACGACAAGACCGGCGAAACCTGGTCGGGCCGCGGACGCACGCCGCTGTGGCTGGCGGCGCTCGAAACGCAAGGGAAGTCGCGCGAAGATTACCGGGTCTGA
PROTEIN sequence
Length: 120
MPRRSYDSIRKQIEKLEAQAKKLEQAAEQHKKQAVAQVVALMRKVGVTMGDLEATRERATRSRGRGAAKAGAGKKAARKPVPPKYRNDKTGETWSGRGRTPLWLAALETQGKSREDYRV*