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SCNpilot_expt_500_p_scaffold_232_curated

Search features with annotation key words

Displaying items 31-60 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_232_curated_31
unknown

Not on your lists

29524..29676
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_32
unknown

Not on your lists

29866..30171
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_33
unknown

Not on your lists

30463..30648
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_34
unknown

Not on your lists

comp(30602..30712)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_35
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31219..31878)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVF1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12456.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_232_curated_36

Not on your lists

comp(31878..32987)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09672.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
permease
SCNpilot_expt_500_p_scaffold_232_curated_37
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32998..33525)
DNA (528bp) protein (176aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031AA301
Uncharacterized protein {ECO:0000313|EMBL:AIL12457.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_38
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33522..34607)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B51718
Uncharacterized protein {ECO:0000313|EMBL:AIL12458.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_39
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34671..35093)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HBY3_9PROT
SCNpilot_expt_500_p_scaffold_232_curated_40
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35118..35573)
DNA (456bp) protein (152aa)
holC; DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III subunit chi n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YB37_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12460.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_41
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35586..37082)
DNA (1497bp) protein (499aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KFH9_9PROT
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_42
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37286..37453
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Bartonella australis (strain Aust/NH1) RepID=M1NYH4_BARAA
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpmG; 50S ribosomal protein L33
SCNpilot_expt_500_p_scaffold_232_curated_43
unknown

Not on your lists

comp(37546..37875)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_44
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38024..38395)
DNA (372bp) protein (124aa)
Putative acyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GY09_RHILT
Putative acyltransferase {ECO:0000313|EMBL:EJB02535.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
fusion protein: acetyltransferase and hypothetical conserved protein
SCNpilot_expt_500_p_scaffold_232_curated_45
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38545..40050)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EDC30
Uncharacterized protein {ECO:0000313|EMBL:AIL12464.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_232_curated_46
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40373..42148
DNA (1776bp) protein (592aa)
Uncharacterized ABC transporter ATP-binding protein HI_1051 n=1 Tax=Cardinium endosymbiont cEper1 of Encarsia pergandiella RepID=K0P0D5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12468.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC transporter ATP-binding protein
SCNpilot_expt_500_p_scaffold_232_curated_47
unknown

Not on your lists

42204..42374
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_48
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42387..43127
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLJ3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP78224.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
hypothetical protein; K07043
SCNpilot_expt_500_p_scaffold_232_curated_49
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43267..43833)
DNA (567bp) protein (189aa)
Putative sigma 54 modulation protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RBP3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AIL12469.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative sigma 54 modulation protein
SCNpilot_expt_500_p_scaffold_232_curated_50
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43932..45425)
DNA (1494bp) protein (498aa)
Inner membrane transporter YbgH n=1 Tax=SAR86 cluster bacterium SAR86A RepID=J4KRV7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL12470.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
di-tripeptide ABC transporter-like protein
SCNpilot_expt_500_p_scaffold_232_curated_51
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45716..47440)
DNA (1725bp) protein (575aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12471.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_52
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47789..49468)
DNA (1680bp) protein (560aa)
ABC transporter (EC:3.6.3.27 3.6.3.41)
heme ABC transporter ATP-binding protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A951
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIL12472.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_232_curated_53

Not on your lists

49667..50944
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=uncultured bacterium RepID=K2FH15_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EKE10070.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
general substrate transporter; K03762 MFS transporter, MHS family, proline/betaine transporter
SCNpilot_expt_500_p_scaffold_232_curated_54
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50902..51822)
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2EI69_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12474.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
LysR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_232_curated_55
unknown

Not on your lists

comp(52238..52534)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_232_curated_56

Not on your lists

comp(52566..53033)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EWD3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09944.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_232_curated_57
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53186..53845
DNA (660bp) protein (220aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibac
Octanoyltransferase n=1 Tax=Bartonella australis (strain Aust/NH1) RepID=M1P421_BARAA
lipB; lipoate biosynthesis protein B
SCNpilot_expt_500_p_scaffold_232_curated_58
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


54070..55113
DNA (1044bp) protein (348aa)
Protein RecA n=1 Tax=Oceanibaculum indicum P24 RepID=K2KCL2_9PROT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
recA; recombinase A; K03553 recombination protein RecA
SCNpilot_expt_500_p_scaffold_232_curated_59
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55131..55418
DNA (288bp) protein (96aa)
YCII-like protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H1K1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AIL12477.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
YCII-like protein
SCNpilot_expt_500_p_scaffold_232_curated_60
unknown

Not on your lists

58575..58739
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 31-60 of 80 in total

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