ggKbase home page

SCNpilot_expt_500_p_scaffold_890_curated_20

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 24378..25583

Top 3 Functional Annotations

Value Algorithm Source
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 399.0
  • Bit_score: 720
  • Evalue 1.00e-204
queuine tRNA-ribosyltransferase id=4896195 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 396.0
  • Bit_score: 592
  • Evalue 2.30e-166
similar to queuine tRNA ribosyltransferase, putative similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 393.0
  • Bit_score: 531
  • Evalue 2.00e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGTTGCCCTACCCAAATTTTCAGTTTGATATTCTTAAGCCTTCTCACAATAGTAAAGCACGTTTAGGACGCTTAATGACTCCTCATGGTATAGTGAATACACCTGCTTTTATTTTTTGTGCGACAAAAGCAGCAATTAAAGGAGCAACACCCAATCAAGTAAATGAAGTTGATACGCAGATTATTTTATCGAATACTTACCATCTTATGTTGCAACCAGGTGGGGAAATAATTGAAAAGCAAGGGGGTTTACATCGTTTCATGGGGTGGAATAAACCTATGCTCACTGATTCAGGAGGATTTCAAATTTTTAGCTTAGGCCATGGTTCTGTGGCAAGTGAGATAAAGGGGAAAAGACTAACAACTCGGCCAAAAACGCTTTTAAAAATTACCGAAGAAGGTGCAAAATTTAAATCCTATATTGATGGACGCATGCATCTTTTAACACCTGAGCGCTCAATACAAGTACAGCGTCAACTGGGAGCAGATCTTATCGTTGTCCTTGATGAATGCACACCTTTTCATGTTGATAAAACCTATACACAAAGATCGATGCAATTGTCACACCGTTGGGCTTTAAGAAGTCTCTCAGAATTTCAACGAACAGATAATCAAAAGCAAGCTTTATACGGAATTATACAAGGGGGAGTATATACTGACCTTCGTTCAGAAAGTTCCAAGTTTGTTAATGATCAACCATTCTTTGGTCATGCCGTTGGTGGATCGCTAGGTGCATCAAAAGAGCAAATGCATGATATTGTAGCTCTAACAATGAGCCTACTTAATCCTGAACGTCCTGTTCATCTTTTAGGGATTGGTGGCGTTAGTGATATCTTCAATGGTGTTCGGCAGGGTATTGATACATTTGACTGTGTTCATCCAACACGTCTTGCTCGTCACGGAGGGGCTTTGATTCAGCCTTCATTTTGGGATAATGAAGACGGGCAGGGAGGAGAGCACATTAACCTTCGTAATGCCCGATTTAGAGAAGACTCAAAGCCAATTGATGAAACTTGCCCTTGCCCCACTTGCAAAACATTTTCACGCTCGTATCTTCATCATTTATTAAGAGCGCAAGAAATATTGGCACTTCAAGCGATAACGATTCACAATATTTCTTTTATGAATCGTTTATTAACTGCAATCCGAGAAGCAATCGCACAAGATCAATTAGAGAGCGAGGAAAAAAATTGGGTTTTTAAATAA
PROTEIN sequence
Length: 402
MLPYPNFQFDILKPSHNSKARLGRLMTPHGIVNTPAFIFCATKAAIKGATPNQVNEVDTQIILSNTYHLMLQPGGEIIEKQGGLHRFMGWNKPMLTDSGGFQIFSLGHGSVASEIKGKRLTTRPKTLLKITEEGAKFKSYIDGRMHLLTPERSIQVQRQLGADLIVVLDECTPFHVDKTYTQRSMQLSHRWALRSLSEFQRTDNQKQALYGIIQGGVYTDLRSESSKFVNDQPFFGHAVGGSLGASKEQMHDIVALTMSLLNPERPVHLLGIGGVSDIFNGVRQGIDTFDCVHPTRLARHGGALIQPSFWDNEDGQGGEHINLRNARFREDSKPIDETCPCPTCKTFSRSYLHHLLRAQEILALQAITIHNISFMNRLLTAIREAIAQDQLESEEKNWVFK*