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SCNpilot_expt_500_p_scaffold_5608_curated_1

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(16..534)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 164.0
  • Bit_score: 184
  • Evalue 8.20e-44
Uncharacterized protein {ECO:0000313|EMBL:AIL13892.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 171.0
  • Bit_score: 318
  • Evalue 6.70e-84
Transposase, IS982 family similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 164.0
  • Bit_score: 175
  • Evalue 1.60e-41

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCTGTTTGCCATAATTTACGAGAAAGGAAACATAAAGTCTTTAAAGGATTGGCTGCTAAAGGAAGAACTTCAACTGGGTGGTTCTTTGGCTTGAAGATTCATTTGATCTTTAATACTCGTGGAGAAATTGTTCGTCTGGCCATCACACCAGGAAATGTTAATGACAAAACTCCTGTTACAGACATGATCAAAGGAATAACAGCCAAACTCATTGGAGATAAAGGATATCTCTCTCAGAAACTCTTCCAACAATTGTTTGAAGATGGCGTCACTCTTATCACCAAAATTAAGAGAAACATGAAGAATATCCTGATGGATACGGCAGATAAATTGATGTTGATGAAAAGGTCTTTTATTGAGACGATATTCTCTTCTCTCAAATCATTAAATACTTTAATCCATCATAGACATAGAAATCCTATCAACGCCTTCGTTCATCTCATAGCAGGACTTATTAGTTATCAACTTAGGGATGACAAACCTTCCTTGCATAGCCTCACTAATCTTATCTCTTAA
PROTEIN sequence
Length: 173
MAVCHNLRERKHKVFKGLAAKGRTSTGWFFGLKIHLIFNTRGEIVRLAITPGNVNDKTPVTDMIKGITAKLIGDKGYLSQKLFQQLFEDGVTLITKIKRNMKNILMDTADKLMLMKRSFIETIFSSLKSLNTLIHHRHRNPINAFVHLIAGLISYQLRDDKPSLHSLTNLIS*