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SCNpilot_expt_500_p_scaffold_5608_curated_5

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4652..6004)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z258_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 317.0
  • Bit_score: 144
  • Evalue 3.20e-31
extracellular repeat-containing protein, HAF family similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 291.0
  • Bit_score: 141
  • Evalue 8.50e-31
Extracellular repeat protein, HAF family {ECO:0000313|EMBL:AEG01499.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 291.0
  • Bit_score: 141
  • Evalue 3.80e-30

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Taxonomy

Methylomonas methanica → Methylomonas → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGATAAATATAAAATATGCTGTATACTCTACATTCATTTTACTATTTTTATCTTTTGACATAAAAGCAAGCTCTTTGTGGGAAGAACTTCCACAAGACATTATCACTTTAACTGCTTCTTTTGTTAGAATAAAAGATGGAATTAATGCTCAACTGGTTTCTAAGCGGTGGCATAAAGTATGGAATAATGATTATATTTGGTACGAATATGTGCAACGATTTCCTGGGCATGAAAGGGTTGTAAAAGAAGTTAATGAGAATGATTGTTCAATTTCTCCTTATTACAAAATGGTTTTTAAAGAACTCTTGACTCTAAAGCTTATTATCCTTGAGAAATTAAATGATGGTCCTGTCAGCTATACAAGCGACATTAGTGGAGATGGCAAGACGCTTGTTGGATACACTCTTAATGCAAATCTACAAAGCAAATTTATACCTTTTATATGGACGCAAGAGGAAGGCATTAACTTTATTAATGCTGCTCATGATAAACAAACCAGCTACACAGCGTCTATAAGTCAAGATGGAAAGATTGTTATTGGATATGAGTCAGATGGCCGTACTTCAAATTCCTATAAATGGACTCAACAAGAAGGAAAAACTCTTCTTAAAAAAATCAATATAAAAGATAAAAATTATGCCTATACGATTAGTGCCAATGGCAAAGTTATTGGCGGGTCTATTCATCTTGAAGGCTCATCAGAGATAGGTACAGCTTGTCTATGGACAGAACAAGGAGAGATAAAATTAACAAAGCTTCCGGCTAATCTTTATAAAAGTAATATTGTTGGTATAAGTGCAGATGGAAGAATTATTCTAGGAAATGCCCATGAAAAAGATAAGCCAGAATATAGTCGATCTTTTTTATGGACAGAGAATGAAGGAACCATTTTGCTTGAAGGACTTACTCAAGGATGTAGCACTTATGCTTGCGGAATAAGTAGTAATGGCCTTACTGTTGTAGGTTATGCTTATGATAATATAGCTGACGCTTACCGAGCATTTACATGGAATAAGAAGGATGGGATTAAATCTCTAGGATCTTTAAGAGATAAGCATCATAGCTATGCGACAGCCGTTAATCAGGATGGTCGTGTCATTGTTGGATATGTGAAAGACAGACACCGCGCTTCATTAAAAGAAGCTTTTATTTGGACAGAGAGTACAGAAATGCTTTCTATTGAAACAATTCTTGGTCAAAAAATACCTAAAGACACTCTCTTAACAGTTGCAACAAGCATCAGTGAGGATGGTACAATTCTCATTGGAGATGCACATAAAGGTGCAATATGGTATGCTTATATTCCAAGGTTAGATATTTTAAAACAAGAAGGTATTCCCCTTTTTAAATAA
PROTEIN sequence
Length: 451
MINIKYAVYSTFILLFLSFDIKASSLWEELPQDIITLTASFVRIKDGINAQLVSKRWHKVWNNDYIWYEYVQRFPGHERVVKEVNENDCSISPYYKMVFKELLTLKLIILEKLNDGPVSYTSDISGDGKTLVGYTLNANLQSKFIPFIWTQEEGINFINAAHDKQTSYTASISQDGKIVIGYESDGRTSNSYKWTQQEGKTLLKKINIKDKNYAYTISANGKVIGGSIHLEGSSEIGTACLWTEQGEIKLTKLPANLYKSNIVGISADGRIILGNAHEKDKPEYSRSFLWTENEGTILLEGLTQGCSTYACGISSNGLTVVGYAYDNIADAYRAFTWNKKDGIKSLGSLRDKHHSYATAVNQDGRVIVGYVKDRHRASLKEAFIWTESTEMLSIETILGQKIPKDTLLTVATSISEDGTILIGDAHKGAIWYAYIPRLDILKQEGIPLFK*