ggKbase home page

SCNpilot_expt_500_p_scaffold_673_curated_15

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 13878..14660

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 234.0
  • Bit_score: 233
  • Evalue 4.30e-58
RNA methyltransferase, TrmH family, group 1; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 243.0
  • Bit_score: 232
  • Evalue 2.10e-58
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISG6_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 243.0
  • Bit_score: 232
  • Evalue 6.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGATAGGCCCAGTTATTATTCTTGTTGAGTCGCAAATCCCGCAAAACATCGGGAAAACAGCGCGTGCAATGCTGAATTGTGAATTACGAGATCTTAGGCTTGTTAGACCTCTTGTCGATCCTTGCCATCGTGATGCACGGGCATTAGCGGCTGGTGCTGATGAAGTTTTGGAAAACGCGAAGATCTTTAATTCTACTGCTGAAGCAATTGCAGACCTTCATCGTGTTTTCTCAACAAGTGCTCGGCATCGAGATATGGTTGAGCTCCAGTTAACGCCTAAGAAAGCGGCAGATCTTTTTGTAACCATGGTTCAAGAAAATCATCGTGTAGGTGTTCTTTTTGGACCTGAACGCGCAGGTCTTGATAATGAAGATGTTGCCTTATGTGAGGGGAATATTTATGTTCCTGTCAATCCGCAGTTTAGTTCTCTTAATCTAGCACAAGCCGTTTTACTTATTGCTTATGAATGGTATCAAGCTAAAACCCAATTTCCTGAAATGACGTTTAAAAAGGGAGAGACGACCCTAGCCACGCGAGAAGAATTAGGAGGATTTTTAATGCATCTTGAGCAAGAATTGGATTATGCAGGCTATTTTAGGGCAGATCATAAAAAACCAAAAATGCTTAGAACAATTCATAATATGTTCTCTAGAGTTCCTTTAACCTCTCAAGAAGTGCGAACTTTACGTGGAATTATATCAGATCTTTCGGACCCTCAGGGCGAAAGAGCAAGGATGACTAAACGAAGACTGCAAAAAAATGAAAAAGAAAGTGAGGTTTAA
PROTEIN sequence
Length: 261
MIGPVIILVESQIPQNIGKTARAMLNCELRDLRLVRPLVDPCHRDARALAAGADEVLENAKIFNSTAEAIADLHRVFSTSARHRDMVELQLTPKKAADLFVTMVQENHRVGVLFGPERAGLDNEDVALCEGNIYVPVNPQFSSLNLAQAVLLIAYEWYQAKTQFPEMTFKKGETTLATREELGGFLMHLEQELDYAGYFRADHKKPKMLRTIHNMFSRVPLTSQEVRTLRGIISDLSDPQGERARMTKRRLQKNEKESEV*