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SCNpilot_expt_500_p_scaffold_1741_curated_4

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1388..2083

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 232.0
  • Bit_score: 336
  • Evalue 1.70e-89
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 231.0
  • Bit_score: 421
  • Evalue 9.80e-115
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 232.0
  • Bit_score: 336
  • Evalue 5.40e-90

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCAAAAATTGGAAAAAGGCTTAAGAAAGCTTATGAGAATTTAGATGCAATGACAGCTTATTCTCTTGAGGAAGCTGTTAAAGTTATTAAAGCACGCGCAACTGCGAAATTTGATGAAACAATTGAAGTTGCTTTAAATTTAAATATTGATACCCGGAAAGCAGATCAAAACTTGCGCGGAATGGTTCAACTTCCAAATGGAACGGGTAAAACTTTACGCGTAGCTGTTTTCGCAAAAGACGAAAAAGCGAAGGAAGCTTTGGCTGCTGGTGCGGACTTTGTTGGTGCTGATGATCTTGCTGAAAAAGTTCAAAAAGGTGAAATCGATTTCGACCGTTGTATTGCAACGCCTGATATGATGCTTGTTGTTGGAAAGCTTGGTAAGGTTTTGGGGCCTAAAGGCCTTATGCCTAATCCTAAGCTTGGGACAGTGACACCTAACGTTGCTGAAGCTGTTAAGGCGGCAAAAGGGGGGCAAATTGAATATCGTGCTGAGAAAGCAGGCATCGTACACGGTGGTGTTGGTAAAGCAAGCTTTACGGAAAAAGCTCTTGTTGAAAATATTAAAGTTTTTGTGGATGTTATTAATAAAGCACGCCCCAGTGGAATCAAAGGAGCTTATTTGAAAAAGATTTCATTAAGTTCAACAATGGGACCATCTGTGCGTGTTGATCCCGCAAATTTTGCGAGTTAA
PROTEIN sequence
Length: 232
MAKIGKRLKKAYENLDAMTAYSLEEAVKVIKARATAKFDETIEVALNLNIDTRKADQNLRGMVQLPNGTGKTLRVAVFAKDEKAKEALAAGADFVGADDLAEKVQKGEIDFDRCIATPDMMLVVGKLGKVLGPKGLMPNPKLGTVTPNVAEAVKAAKGGQIEYRAEKAGIVHGGVGKASFTEKALVENIKVFVDVINKARPSGIKGAYLKKISLSSTMGPSVRVDPANFAS*