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SCNpilot_expt_500_p_scaffold_7714_curated_3

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(2625..2996)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=2 Tax=Rhodospirillum rubrum RepID=RS12_RHORT similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 123.0
  • Bit_score: 223
  • Evalue 1.50e-55
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 249
  • Evalue 2.10e-63
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 123.0
  • Bit_score: 223
  • Evalue 4.70e-56

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGACTATTAACCAATTGATACGCAAACCACGCGTGTCTATCCCAGAACGTAATAAAGTGCCGGCGATGCAAGCCTGCCCTCAAAAGCGTGGTGTTTGTACACGTGTGACAACAACCACACCAAAAAAGCCAAACTCTGCGTTACGTAAGATTGCTCGTATTCGTCTAACCAATGGGATGGAAGTGACGGGCTATATTCCTGGGGAAGGACACAACTTACAAGAGCACTCAGTCGTTCTTATTCGTGGCGGACGTGTTCCCGACCTTCCTGGTGTTCGTTATCATATTATTCGTGGTACCTTAGATACCCAAGGCGTTGCAAAGCGTCGCCAAGGGCGGTCTAAATATGGTGCTAAGCGTCCAAAGTAG
PROTEIN sequence
Length: 124
MPTINQLIRKPRVSIPERNKVPAMQACPQKRGVCTRVTTTTPKKPNSALRKIARIRLTNGMEVTGYIPGEGHNLQEHSVVLIRGGRVPDLPGVRYHIIRGTLDTQGVAKRRQGRSKYGAKRPK*