ggKbase home page

SCNpilot_expt_500_p_scaffold_4022_curated_4

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 4840..5754

Top 3 Functional Annotations

Value Algorithm Source
Putrescine transport system permease protein PotH n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQB9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 293.0
  • Bit_score: 368
  • Evalue 5.40e-99
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AIL12917.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 304.0
  • Bit_score: 549
  • Evalue 2.40e-153
potH; binding-protein dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 281.0
  • Bit_score: 361
  • Evalue 2.10e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAACCTAGAAAATCTAAAAAATTATTTTGAGCGCATCTTTGGAAAAGCAATATTAATAGCTGTTCCTTATGGATGGCATATTGTATTCTTTTTTATTCCTCTTCTTATTGTATTTGGTCTTAGTTTTTCAGATAGTATTGTAGGGGCACCACCATTTGCCTCGATTATTTCTTGGGTAGATGAAAGTTTTCTACAAATTCGGCTGAATTTGTGGAATTACCAATTATTAAAGGAAGATAGCCTATATCTTTCGGGGTATGTAGAATCCTTGCGGATTGCTGGGTTAGCAACATTCTTTTGTCTTCTTATTGGTTATCCTATAGCTTATGGGATTTCTCGAGTAAATGCGAAAACAAGGATAATTTTATTATTACTTGTTATTTTACCATTTTGGACCTCTTTTTTGATACGCGTTTACGCTTGGATTGGGCTATTAAATTATCATGGAATTATCAATAATTTTTTACTAGACCTGAAGATTATATCTCAGCCTTTGCCTCTTAATAATAATAAATTTTCTGTTTGTTTAGGGATCGTATATTCTTATCTGCCATTTATGATTTTACCTCTTTATTCAGCTTTAGAAAAAATTGATTATCAAATTCTCGAAGCTGCCTATGATTTGGGTTGTAAACCTGCAAGAGCTTTTTGGACAATTACGGTGCCGCTTTCTATGAAAGGAATCATTGCTGGATCAATGCTTGTCTTTATTCCAGCTGTAGGGGAATTTGTTATTCCAGAACTTTTGGGCGGACCCGATACAATTATGATTGGAAAAATTTTGTGGACTGAATTTTTTACGAATAGAGATTGGCCTGTTGCAGCGGCTCTTGCAATGGCAATGCTTATATTGCTTGTATTACCAATTATAGGTTTCCAAAAATTTACAATGCAACCACAGGAAAAGGAATAA
PROTEIN sequence
Length: 305
MNLENLKNYFERIFGKAILIAVPYGWHIVFFFIPLLIVFGLSFSDSIVGAPPFASIISWVDESFLQIRLNLWNYQLLKEDSLYLSGYVESLRIAGLATFFCLLIGYPIAYGISRVNAKTRIILLLLVILPFWTSFLIRVYAWIGLLNYHGIINNFLLDLKIISQPLPLNNNKFSVCLGIVYSYLPFMILPLYSALEKIDYQILEAAYDLGCKPARAFWTITVPLSMKGIIAGSMLVFIPAVGEFVIPELLGGPDTIMIGKILWTEFFTNRDWPVAAALAMAMLILLVLPIIGFQKFTMQPQEKE*