ggKbase home page

SCNpilot_expt_500_p_scaffold_1077_curated_5

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3498..4523

Top 3 Functional Annotations

Value Algorithm Source
kdsD; arabinose5-phosphate isomerase KdsD (EC:5.3.1.13) similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 323.0
  • Bit_score: 342
  • Evalue 1.90e-91
Sugar phosphate Isomerase n=1 Tax=uncultured bacterium RepID=C5JBK2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 330.0
  • Bit_score: 356
  • Evalue 4.10e-95
D-arabinose 5-phosphate {ECO:0000313|EMBL:AIL12308.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 321.0
  • Bit_score: 550
  • Evalue 1.60e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGACAGTTCTTGCTTTTAATTCTTCTGCGAATTCAAAAATACAGCCTTCTAATCCAGAGCAACAATTTACCTTAGAAGAGGCTCAGCGTGTTTTAAATTTAGAAGCAAACGCTCTTCAATCGCTTGCAACAACGCTCGATGAAAATTTCTTGAAAGCTTGTCAGATTATTGTTGATACAAAAGGTCGCGTTGTTGTTTCAGGCATGGGTAAAAGTGGACATATTGCGCGTAAAATTGCAGCAACATTTTCTTCTACGGGAACTCCTTCATTGTTTGTCCATCCAGCTGAAGCAAGTCATGGTGATTTAGGAATGATTTCACCCAATGACGTTTTAATTGTTTTGTCTTCGTCAGGAGAAACAACAGAACTCTCTAATTTACTAGCTTATGCTCAGCGTCGTCTCATTCCTATTATTGCGATAACGCAAAAAAAAGAGAGTACTCTAGCTGAAACATCAACAATAACATTGCTTTTACCTTCAATTGAAGAAGCTTGTCCTTTAGGGCTTGCGCCCACAACATCGACAACGATGATGTTAGCTTTGGGGGATGCTTTGGCGACAACACTTCTGAATTTTAGAAGTTTTTCTCCTGAAGATTTCGGCCTTTTTCATCCTGGTGGTAAACTAGGGCAACGTTTGATTAGAGTATCGCAAATTATGCACAAGAATGAGAAAATTCCTACAGTGCCTATGGGAACCCCAATGGATCAAGCTATTTTAATAATGACATCTCACGGTTTTGGATGTGTAGGTGTTGTCGAAAATTCGGACCGTTTGATTGGCGTTATTACAGATGGAGATTTGAGGCGCCATATGAATACGCATCTTTTATCGTCTCCTGTTGAAGAGATAATGACAAATCATCCTTACACAATTCATGCTGGAGCTTTGGCAGAGGAAGCACTTGCATTTATGAATGAAAAGAAAATTACAGCACTTTTTGTTGTTGATAGCAAAAAAGAGAAAGAACACATTGTAGGAATTGTTCATGTTCATGATTTTTTAAGAGCAAATATTTCTTAA
PROTEIN sequence
Length: 342
MTVLAFNSSANSKIQPSNPEQQFTLEEAQRVLNLEANALQSLATTLDENFLKACQIIVDTKGRVVVSGMGKSGHIARKIAATFSSTGTPSLFVHPAEASHGDLGMISPNDVLIVLSSSGETTELSNLLAYAQRRLIPIIAITQKKESTLAETSTITLLLPSIEEACPLGLAPTTSTTMMLALGDALATTLLNFRSFSPEDFGLFHPGGKLGQRLIRVSQIMHKNEKIPTVPMGTPMDQAILIMTSHGFGCVGVVENSDRLIGVITDGDLRRHMNTHLLSSPVEEIMTNHPYTIHAGALAEEALAFMNEKKITALFVVDSKKEKEHIVGIVHVHDFLRANIS*