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SCNpilot_expt_500_p_scaffold_2642_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 370..909

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 179.0
  • Bit_score: 339
  • Evalue 2.90e-90
50S ribosomal protein L5 id=3298584 bin=GWC2_Alphaproteobacteria_42_16 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 179.0
  • Bit_score: 264
  • Evalue 6.50e-68
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 178.0
  • Bit_score: 262
  • Evalue 1.30e-67

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGTCCGGTTACGTGAACATTATGATAAAGTTGTGAAGTCCGAACTCATAAAACAGTTCAATTATACAAATCCTATGGAAGTTCCTAAGATTGAAAAAATTGTTTTGAATATGGGCGTAGGTGAAGCAGCGCAAGATAAAAAGAAAATTGAAATTGCACTAAGTGAACTTATGGCAATTTCTGGGCAAAAGCCAGTAACAACTAAGGCAAAAAAGTCAATTGCTGGATTTAAAGTGCGTGAAGGTATGCCATTAGGTGTGAAAGTTACGCTTCGTCAAGCAAGGATGTATGAATTTTTAGATCGCCTTGTAAATATCGCGATGCCACGTATCAGAGATTTTAGAGGAATTTCTAAAAAATGCTTTGATGGTCGCGGAAATTTTGCTATGGGCATTAAGGAACACATTGTGTTCCCTGAAATTGACTATGATAAAGTTGAGAAGGTTCGAGGTCTCGATATTATTATTGTGACAACAGCTCGGACAGATTCAGAAGCGTTAGCTTTGTTGAGCGGGTTTAATTTCCCTTTTATGAATTAA
PROTEIN sequence
Length: 180
MVRLREHYDKVVKSELIKQFNYTNPMEVPKIEKIVLNMGVGEAAQDKKKIEIALSELMAISGQKPVTTKAKKSIAGFKVREGMPLGVKVTLRQARMYEFLDRLVNIAMPRIRDFRGISKKCFDGRGNFAMGIKEHIVFPEIDYDKVEKVRGLDIIIVTTARTDSEALALLSGFNFPFMN*