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SCNpilot_expt_500_p_scaffold_2642_curated_6

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 2192..2545

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4F7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 120.0
  • Bit_score: 143
  • Evalue 1.90e-31
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 117.0
  • Bit_score: 212
  • Evalue 2.70e-52
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 120.0
  • Bit_score: 142
  • Evalue 7.70e-32

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGTTGACTGTTCAAGATAAATTTAATCGTCGTAAGCAAAGAGTTAGAGCGCATATAGCGCGCGTTGCCGTTGGACGTCCAAGGCTCACTGTTTACCGTTCTAATAAAAACATTTATGCGCAAGTAATAGATGATGAAAATCGCCGTACTTTAATAGCTGCTTCCACGCTTGATAAAAGCATGAAAGGAAGTGGCGGAAATAAGAAAGCTGCTGAGTTAGTTGGAAAGCTAATTGCAGAAAAGGCAAAAAAATTAGGTGTTACAAACGTTGTTTTTGATAGAGGGGCATACCTTTATCATGGCCGTGTTAAGGTTTTGGCTGAAGCCGCGCGTGCGCATGGCTTATCATTCTAA
PROTEIN sequence
Length: 118
MLTVQDKFNRRKQRVRAHIARVAVGRPRLTVYRSNKNIYAQVIDDENRRTLIAASTLDKSMKGSGGNKKAAELVGKLIAEKAKKLGVTNVVFDRGAYLYHGRVKVLAEAARAHGLSF*