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SCNpilot_expt_500_p_scaffold_2642_curated_8

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3098..3292

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSI7_RHOPH similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 62.0
  • Bit_score: 84
  • Evalue 5.70e-14
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 64.0
  • Bit_score: 118
  • Evalue 5.00e-24
rpmD; Ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 62.0
  • Bit_score: 84
  • Evalue 1.80e-14

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGACTAAAGAACAGAAAAAAATCCGTATTACCCAAGTGATTAGTGCAAATAGGCGGCCTGCTAGCCAAGCAGCCGTTTTAATTGGGCTAGGATTGAATAAATTACATCGTACACGGGATTTAGAAGATACACCTTCTGTTCGTGGAATGATTAATAAAGTAAAACATCTGTTGCGTATTGAAGAAAATTTTTAG
PROTEIN sequence
Length: 65
MTKEQKKIRITQVISANRRPASQAAVLIGLGLNKLHRTRDLEDTPSVRGMINKVKHLLRIEENF*