ggKbase home page

SCNpilot_expt_500_p_scaffold_515_curated_1

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(662..1357)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 218.0
  • Bit_score: 265
  • Evalue 1.50e-68
Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=K2EGJ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 227.0
  • Bit_score: 273
  • Evalue 1.80e-70
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 227.0
  • Bit_score: 273
  • Evalue 2.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAAAGAACGTATTGCTAAATTAATGGCACGCTCAGGCGTTTGTTCACGGCGTGAAGCCGAAAGGTGGATTGAAGAAGGTCGCGTTCAAGTGAATGGTGTTCTTTTAAATTCTCCAGCCATAGTCGTATCAGAACATGATATTATTCTTGTTGATGGCAAACCTTTACCCTCCAAAGAACCCGTCTGTCTTTGGCTATATCACAAACCTAAGGGGTTAATTACTTCCCATAAAGATCCTGAAAATCGCCCAACCATTTTTGAAGCTTTACCAAAGGACCTCCCACGCGTCATTTCAGTCGGTCGCCTTGATAAAATGACGGAAGGTTTATTGTTGTTAACCAATGATGGCGAATTAGCTCGTAAGCTAGAGCTTCCAGTAACGCGTTTAAAACGTATCTATCATGTTCGTATTTATGGTCATTTACAGGAAAATAAACTTAAAGAAATTGCAAAAGGGATAACTTTTGAAGGAATTCATTACCAAGGTGCAGAAATAACAGTCTTAAAACAGTCGGGTATGAATACATGGTTAGAAGTTTCAATTTATGAAGGTAAAAACCGAGAAGTCAGAAATTTGATGAGTTATTTAAATGTTCAAGTTTCACGTCTCATCCGAGTGGCTTATGGACCTTATAAGCTTGGAGATTTGGCAGTGGGTCAAATCAAAAAATGCCCCTTAAAAGAATTTGATTAA
PROTEIN sequence
Length: 232
MKERIAKLMARSGVCSRREAERWIEEGRVQVNGVLLNSPAIVVSEHDIILVDGKPLPSKEPVCLWLYHKPKGLITSHKDPENRPTIFEALPKDLPRVISVGRLDKMTEGLLLLTNDGELARKLELPVTRLKRIYHVRIYGHLQENKLKEIAKGITFEGIHYQGAEITVLKQSGMNTWLEVSIYEGKNREVRNLMSYLNVQVSRLIRVAYGPYKLGDLAVGQIKKCPLKEFD*