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SCNpilot_expt_500_p_scaffold_515_curated_14

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(13875..15131)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 418.0
  • Bit_score: 798
  • Evalue 5.30e-228
Transcription termination factor Rho n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYG8_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 418.0
  • Bit_score: 692
  • Evalue 2.90e-196
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 418.0
  • Bit_score: 692
  • Evalue 9.20e-197

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGAACATCCAAGAGCTTAAGCTTAAATCGCCAGCTGATCTGTTGGCAATTGCCGAAGAACATGAAATTGAAAACGCAAGTTCCCTAAAAAAACAAGACCTTATCTTTGCCATCCTTAAACAACTTGCGAGCAAAGACATTCCGATTTACGGTGGAGGTGTTCTTGAAATTTTGCAGGATGGCTATGGTTTTTTACGCTCTCCTCAAATGAACTTTCTTGCGGGACCAGATGACCTTTATGTTTCACCGAGCCAAATCCGACGCTTTGGTCTGCGTACCGGCGATGTACTTGATGGCCAAATCCGCGCCCCTAAAGAAGGAGAGCGTTATTTTGCACTTTTAAAGTTAAACACGATTAACTTTGAGGACCCAGAACAAGCTAAGCATCGGATTAATTTTGATAATTTGACGCCTCTTTATCCTAATCAACGTCTTAAAATGGAGATTGATAATCCAGAAAATGGGGATCTTACGACGCGCGTGGTTGATCTTATCTCCCCCCTTGGAAAAGGTCAGCGTGCCCTTATTACTGCGCCGCCTCGAACGGGTAAAACAGTTATGTTGCAACAAATCGCGAACGCTATTTCTATAAATCATCCAGAAGTTTATCTTATTGTTTTGTTGATTGATGAGCGTCCTGAAGAAGTCACGGATATGGCGCGTTCTGTAAAGGGAGAAGTTTTAAGTTCGACTTTCGATGAACCTGCTAGCCGCCACGTACAAGTAGCAGAAATGGTGATTGAAAAAGCCAAAAGACTTGTCGAAGGAAAGCGCGATGTCGTTATTTTGTTAGACTCTATTACACGTCTTGCACGCGCTTATAACACGATTGTTCCGTCTTCTGGTAAGGTTTTGACGGGAGGTGTTGATGCGAATGCCCTTCAACGTCCAAAACGTTTCTTTGGGGCTGCGCGTAATATTGAAGAAGGTGGATCTTTGACAATTATTGCAACAGCGTTGGTAGAAACGGGCTCAAGAATGGACGAAGTTATTTTCGAAGAATTCAAAGGAACTGGTAACGCTGAAATTATTTTGGATCGTAAGCTTTCTGATAAAAGAATCTTCCCTGCAATTGATATTACGCGATCCGGTACACGAAAAGAAGAATTACTTGTTGAAAAAAGCGAGCTTTCCAAAGTATGGGTTCTCAGGCGCATTTTGGCACCTATGGGCGCAAACGATGCGATGGAATTCATGCATGACAAGTTAAGAGCGACTAAAAACAATCAAGACTTCTTTACCTCGATGAATTCATAA
PROTEIN sequence
Length: 419
MNIQELKLKSPADLLAIAEEHEIENASSLKKQDLIFAILKQLASKDIPIYGGGVLEILQDGYGFLRSPQMNFLAGPDDLYVSPSQIRRFGLRTGDVLDGQIRAPKEGERYFALLKLNTINFEDPEQAKHRINFDNLTPLYPNQRLKMEIDNPENGDLTTRVVDLISPLGKGQRALITAPPRTGKTVMLQQIANAISINHPEVYLIVLLIDERPEEVTDMARSVKGEVLSSTFDEPASRHVQVAEMVIEKAKRLVEGKRDVVILLDSITRLARAYNTIVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVETGSRMDEVIFEEFKGTGNAEIILDRKLSDKRIFPAIDITRSGTRKEELLVEKSELSKVWVLRRILAPMGANDAMEFMHDKLRATKNNQDFFTSMNS*