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SCNpilot_expt_500_p_scaffold_515_curated_19

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 18582..19253

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, epsilon subunit and related 3'-5' exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 227.0
  • Bit_score: 274
  • Evalue 3.20e-71
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AIL13594.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 222.0
  • Bit_score: 383
  • Evalue 2.90e-103
DNA polymerase III, epsilon subunit id=4920980 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 222.0
  • Bit_score: 296
  • Evalue 2.50e-77

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGTGAAATTGTCCTGGATACAGAAACGACTGGATTTGAGCCATCTGAGGGGCATAGGCTCGTGGAAATTGGGTGTCTTGAGCTCATCAATTTTGTCCCTACAGGAGCGGTTTTCCATAAATATATCAATCCTGAGCGTGATGTCCCAATTGAGGCTTTTAACGTTCATGGTCTTTCTTATGACTTTTTAAAAGATCATCCAAAATTTAACGACATTCACGATCAATTCCTTGATTTTATTGGCGAAAGTCCTTTAGTCATTCATAATGCACGTTTTGATATGAAATTCTTAAATGCAGAACTTGAACGCCTTAATAAGCCAAGCTTACCTTCTGAAAGAGCGATTGATACGCTTGCTCTTGCGAAAAGACTCTTTCCAGGGTCGCCTGCAAGCCTTGATGCATTATGTAAACGATTTGAGATTGATAATTCAAATCGGATTAAGCATGGCGCTTTGTTAGATGCTGAATTGCTCGCTGAAGTTTATCTAGAACTTAAAGGTGGGCGTCAACCGACCCTTAACTTGGCTTTGAAATCTACGATCGCAACGACCGAAGTAACTGAGAAAAAGTTTTATCCACCGCGATCTTTTGAAATCCCGGCGGATGAATTAGAAAACCATCAAGCTTTCTTAGATAAGCTTAAGAACCCGCTGTGGCGCTCTCGTTAG
PROTEIN sequence
Length: 224
MREIVLDTETTGFEPSEGHRLVEIGCLELINFVPTGAVFHKYINPERDVPIEAFNVHGLSYDFLKDHPKFNDIHDQFLDFIGESPLVIHNARFDMKFLNAELERLNKPSLPSERAIDTLALAKRLFPGSPASLDALCKRFEIDNSNRIKHGALLDAELLAEVYLELKGGRQPTLNLALKSTIATTEVTEKKFYPPRSFEIPADELENHQAFLDKLKNPLWRSR*