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SCNpilot_expt_500_p_scaffold_874_curated_2

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1011..1304

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha {ECO:0000313|EMBL:AIL12715.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 2.80e-39
Integration host factor subunit alpha id=4468871 bin=GWC2_Alphaproteobacteria_42_16 species=Maritimibacter alkaliphilus genus=Maritimibacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 97.0
  • Bit_score: 110
  • Evalue 8.50e-22
integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 92.0
  • Bit_score: 103
  • Evalue 3.30e-20

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGCCAGTAAAGACCCTTACACGCGCTGAAATTAGTGATGCGATTGCTGAAAGTATTAACTTTCCACGCCATCGTGCTATGGAAATTTTAGAACAAATTCTTGAACAGATGATTGTTGGCCTTGTTAAAGAAGGTGAACTTAAACTTTCTTCATTTGGAAGTTTTAATGTGCGCAAAAAAAGCAACCGTATCGGACGCAATCCGAAGACAGGCAAAGAAGTCATGATTACACCTCGTAAAACGATTTCTTTTCGAGCTTCTCACATCCTTAAGGATGGTGTGTCTAGGAAATAA
PROTEIN sequence
Length: 98
MPVKTLTRAEISDAIAESINFPRHRAMEILEQILEQMIVGLVKEGELKLSSFGSFNVRKKSNRIGRNPKTGKEVMITPRKTISFRASHILKDGVSRK*