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SCNpilot_expt_500_p_scaffold_992_curated_21

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 20475..20729

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LHG7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 82.0
  • Bit_score: 141
  • Evalue 3.90e-31
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 8.70e-37
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 82.0
  • Bit_score: 140
  • Evalue 2.70e-31

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCACATAAAAAGGCTGGCGGTAGCTCTCGTAACGGACGCGATTCTCAAGGTCGTCGTTTGGGTGTAAAAAAATTTGGTGGCGAGTCCGTCATTTCAGGAAACATTATTGTTCGTCAAAGAGGGACAAAATTTCACCCTGGTAAAAATGTTGGAATTGGGACAGATCATACTCTTTTTGCAACAATTGAAGGTAAAGTACAATTTTCTTCAGGCATAAAAGGTCGCACATACGTTTCTGTTATTACTCAGTAA
PROTEIN sequence
Length: 85
MAHKKAGGSSRNGRDSQGRRLGVKKFGGESVISGNIIVRQRGTKFHPGKNVGIGTDHTLFATIEGKVQFSSGIKGRTYVSVITQ*