ggKbase home page

SCNpilot_expt_500_p_scaffold_83_curated_10

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 10771..12090

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0F7_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 278.0
  • Bit_score: 81
  • Evalue 3.30e-12
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0F7_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 278.0
  • Bit_score: 81
  • Evalue 3.30e-12
Predicted protein {ECO:0000313|EMBL:BAK00829.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 278.0
  • Bit_score: 81
  • Evalue 4.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hordeum vulgare → Hordeum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1320
ATGATGAAAAAAGTTATTCAAACCCTTTTCACTCTTCTCCTCTCAACCACCGTGTCCTTCGCAAGTCCTAATCTCGGCGAAGAAGAGAAGGACCAAAGTCACACTCATTTTATCTCTTACGATGATTTTGCATTTGCAGAAGAAGAATGGAATACGGAGCAACTGCAAGAGTTGATATTAAGCGATATTCACAGTTACTTAGAGGTAGAAAACGTAGAATTGGTGGCATCAAAGCTTTCACGCTTTTCAAATCTGCAAAAGTTGGGTTTCTCGCGTCAGGGGATGACAGAAATTACAGAAAAAACTATAGAAACTTTAACCTCTGCAATCCAAAATTTGACTCATCTTCATACATTGGAGTTATGGTTTATGGGAATTAGCGGAGATATGGCCTTTCTAAGAACACTTCCCTCGACGCTTACACATCTGGATCTGAATGGCAATGATCTTAAGTGTGAGGGGGCGCAAGCTTTAGCCTTAAATATTCCCTCTAAACTTCAAACCTTGATTTTAGAAAATGCTTCTATTCCTGAAGAAGGCTTGAGAAATTTAATTACGGCGCTTCCTCATAGCCTTGAAGAATTAAATTTACTGGGTAACTTTTTTGATAAAAGCATGGTAGATGCTTTAACGCGTCTTACTAATCTCAGAGTATTGAAACTCAACTATAATAGTCAGGATGGAAGCGCTAATATTTTAGCGTCAGGGATTACATCTCTTTCTCAGCTTGAAAAATTGACATTACTTTTGACGGATTCGCGGGGGATACTTAATGTAATCCAAGCTCTCCCACATGGCGTTCAGGAATTAATTTTGAGTTCTGGTCTTCCTGCCGTTAATGATGAAGAGACCCAAGTTTTAATTGAGGAGCTTCCCCAAAACCTTCAATTGTTGGGTTTAGGTGGATGTGAAATTGGTGATAAGTCAATCCCCGCTTTAATTACGTACATCTCGAATAATCAAGCTTTTGAAAATCTCGTTCTGCAGAGTGGAAGCAAAATTGATGATAGAAGTATGCAAGCTTTACTTTTAGGAGTTTCTGCAGGTATTTCCCATCTAAAAAGTTTAAATATACTGGGTTTCCTAGATTTTCAAAAAATAGAAAAGCCATTTTCTATATTGAAATCAAATACAACTCTCGAGCATTTAAATTTACCGTTCTTAAGTTTCCAAGAAGGTGCAAATGAAGACATTTCAAGTTGGTTAGAAGTCACGCCTAGTCTTCAAAAATTACTTGTTAAGGGAAACCTTACAGAGAATAATCAAAAACAATTACAGAATAATAAAACACGGGCTCGAACATTGAGGTCTTACGCATAA
PROTEIN sequence
Length: 440
MMKKVIQTLFTLLLSTTVSFASPNLGEEEKDQSHTHFISYDDFAFAEEEWNTEQLQELILSDIHSYLEVENVELVASKLSRFSNLQKLGFSRQGMTEITEKTIETLTSAIQNLTHLHTLELWFMGISGDMAFLRTLPSTLTHLDLNGNDLKCEGAQALALNIPSKLQTLILENASIPEEGLRNLITALPHSLEELNLLGNFFDKSMVDALTRLTNLRVLKLNYNSQDGSANILASGITSLSQLEKLTLLLTDSRGILNVIQALPHGVQELILSSGLPAVNDEETQVLIEELPQNLQLLGLGGCEIGDKSIPALITYISNNQAFENLVLQSGSKIDDRSMQALLLGVSAGISHLKSLNILGFLDFQKIEKPFSILKSNTTLEHLNLPFLSFQEGANEDISSWLEVTPSLQKLLVKGNLTENNQKQLQNNKTRARTLRSYA*